Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34880 |
Symbol | |
ID | 4385335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3105621 |
End bp | 3106370 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325371 |
Product | GntR family transcriptional regulator |
Protein accession | YP_790940 |
Protein GI | 116050243 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000127927 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.954426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAC TGCTCCCGCT TTCTCCCGTG CCGCTGTACA GCCAGCTCAA GGAGCTGCTG CGCGGGCGCA TCCTCGACGG CGTCTACCCG CCGCTCAGCC GCATGCCTTC GGAGAACGAG CTGGGCAAGG CCTTCGACGT CAGCCGCATC ACCGTGCGCC AGGCGCTCGG CGACCTGCAG AAGGAAGGGC TGATCTTCAA GATCCACGGC AAGGGCACCT TCGTCGCTCG GCCGAAGGCG TTCCAGAACG TCAGCACCCT GCAAGGCCTG GGCGAGTCCA TGACGCAGAT GGGCTACGAG GTCATCAACC GCCTGCACGG CCTGCGCTAC GTGCCGGCCG GCGCGCAGGT GGCCGAGCGC CTGCGGGTGG AAGAGGGCAG CCCTGTGTGC GAGATCAAGC GGGTGCGCCT GGTCAACCGC GAGCCGGTTT CGCTGGAAGT CACCTACCTG CCGCAGGCGC TCGGCGAGCG CCTGGAGAAG GCCGACCTGG TGACCCGCGA CATCTTCCTG ATCCTCGAGA ACGATTGCGG CATTCCCCTC GGCCATGCCG ACCTGGCCAT CGACGCGGTG CTCGCCGATG CCGACCTGAC CCGCGCCCTG GCGGTCGAGG AGGGCGCGCC GATCATGCGC ATCGAGCGCC TGACCCATGC CGCCGACGGC GCGCCGCTGG ACTTCGAATA CCTCTACTAC CGCGGCGACG CTTTCCAGTA TCGCCTGCGC ATCGATCGGC AGAAGGGAGA GCGGGCATGA
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Protein sequence | MGKLLPLSPV PLYSQLKELL RGRILDGVYP PLSRMPSENE LGKAFDVSRI TVRQALGDLQ KEGLIFKIHG KGTFVARPKA FQNVSTLQGL GESMTQMGYE VINRLHGLRY VPAGAQVAER LRVEEGSPVC EIKRVRLVNR EPVSLEVTYL PQALGERLEK ADLVTRDIFL ILENDCGIPL GHADLAIDAV LADADLTRAL AVEEGAPIMR IERLTHAADG APLDFEYLYY RGDAFQYRLR IDRQKGERA
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