Gene PA14_34880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34880 
Symbol 
ID4385335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3105621 
End bp3106370 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID639325371 
ProductGntR family transcriptional regulator 
Protein accessionYP_790940 
Protein GI116050243 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000127927 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.954426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAC TGCTCCCGCT TTCTCCCGTG CCGCTGTACA GCCAGCTCAA GGAGCTGCTG 
CGCGGGCGCA TCCTCGACGG CGTCTACCCG CCGCTCAGCC GCATGCCTTC GGAGAACGAG
CTGGGCAAGG CCTTCGACGT CAGCCGCATC ACCGTGCGCC AGGCGCTCGG CGACCTGCAG
AAGGAAGGGC TGATCTTCAA GATCCACGGC AAGGGCACCT TCGTCGCTCG GCCGAAGGCG
TTCCAGAACG TCAGCACCCT GCAAGGCCTG GGCGAGTCCA TGACGCAGAT GGGCTACGAG
GTCATCAACC GCCTGCACGG CCTGCGCTAC GTGCCGGCCG GCGCGCAGGT GGCCGAGCGC
CTGCGGGTGG AAGAGGGCAG CCCTGTGTGC GAGATCAAGC GGGTGCGCCT GGTCAACCGC
GAGCCGGTTT CGCTGGAAGT CACCTACCTG CCGCAGGCGC TCGGCGAGCG CCTGGAGAAG
GCCGACCTGG TGACCCGCGA CATCTTCCTG ATCCTCGAGA ACGATTGCGG CATTCCCCTC
GGCCATGCCG ACCTGGCCAT CGACGCGGTG CTCGCCGATG CCGACCTGAC CCGCGCCCTG
GCGGTCGAGG AGGGCGCGCC GATCATGCGC ATCGAGCGCC TGACCCATGC CGCCGACGGC
GCGCCGCTGG ACTTCGAATA CCTCTACTAC CGCGGCGACG CTTTCCAGTA TCGCCTGCGC
ATCGATCGGC AGAAGGGAGA GCGGGCATGA
 
Protein sequence
MGKLLPLSPV PLYSQLKELL RGRILDGVYP PLSRMPSENE LGKAFDVSRI TVRQALGDLQ 
KEGLIFKIHG KGTFVARPKA FQNVSTLQGL GESMTQMGYE VINRLHGLRY VPAGAQVAER
LRVEEGSPVC EIKRVRLVNR EPVSLEVTYL PQALGERLEK ADLVTRDIFL ILENDCGIPL
GHADLAIDAV LADADLTRAL AVEEGAPIMR IERLTHAADG APLDFEYLYY RGDAFQYRLR
IDRQKGERA