Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34320 |
Symbol | |
ID | 4380407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3051282 |
End bp | 3052517 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325328 |
Product | DszC family monooxygenase |
Protein accession | YP_790897 |
Protein GI | 116050286 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.404084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0301883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG AAACCGCACC CAAGGATCTT CGTGATCAGG CGCCCCGGCT ACTCCCGGCA CGCCTCATCG AGAACGACGC CCAGGCGTTG CAGGCCGCCC ACGAGGTAGC CGGACTGGCC CGTCGCGAAG CGGCGCTACG CGACCGCGAA CGACGCCTGC CCTGGCAGGA ACTGGAACTC TTCACCCGCC TCGGCCTGGG CGGCATCGGC ATTCCCCGCG CCCATGGCGG CGCGCAGGTT TCCCACGTGA CCCTGGCCGA GGTGTTCCGC GTCATCTGTG CCGCCGACCC GGCCCTCGGA CAGATTCCGC AGAACCAGTT CGGCCTGCTC AGCGTGATCG ACAACGTCGC CAGCCCGGCG CAGAAACGCA AGCTGTTCCG TGGCATCCTC GACGGCCGCC GGCTGGCCAA CGCCGGCCCG GAGCGCAATA CCCGCCATAC CCTTGAGCTG AAGGCGCGGG TCCGTCGCGA CGGCGACGGC TACCGGGTCA GCGGCGAGAA GTTCTACTCC ACCGGCGCCT TGTTCGCCCA CTGGGTGGCG GTCAAGGCCA TCGACGAGGA AGAGCGCGCG GTGATGCTCT TCGTCGAGCG CGGCGCTCCC GGCCTGCGCA TCGTCGACGA CTGGTCCGGC TTCGGCCAGC GCACCACCGC CAGCGGCACG GTACTGCTGG ACGAGGTTCC GGTAGCCGGC GACATGCTGA TCCACAACGG CCTGCTGGCC GAGATCCCGA GCCTCCAGGG CGCCGTCTCG CAACTGATCC AGGCCGCCAT CGACGCCGGC ATCGCCCAGG CGGCGCTGGA CGACGCCCAG GCGTTCGTCC GCGAACGCAG CCGGCCCTGG ATCGACGCCC AGGTCGAACG CGCCAGCGAC GAGCTTTACA GCATCGCCGA GGTCGGCCGC CTGCAAATCG AGCTGCACGC CGCCAACGCC CTGCTGGAGA AGGCCGGCCA GGTCCTCGAC GAAGTGGCCG CGCGGCCGGT GGACGCCGAG TCGGCGGCAC GCGCCTCGAT CGCCGTGGCC GAGGCCAAGG TGCTGAGCAC CGAGATCAGC CTGGCCGCCA GCGAGAAGCT CTTCAAGCTG GCCGGCAGCC GCGCCACGCT CGCCAAGTTC AACCTCAACC GGCACTGGCG CAACGCCCGC ACCCACACCC TGCACGACCC GGTACGCTGG AAGGTCCACG CGGTCGGCGA CTACTACCTG AACGGCGCCC GTCCGGCGCG TCACTCATGG ATCTGA
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Protein sequence | MTDETAPKDL RDQAPRLLPA RLIENDAQAL QAAHEVAGLA RREAALRDRE RRLPWQELEL FTRLGLGGIG IPRAHGGAQV SHVTLAEVFR VICAADPALG QIPQNQFGLL SVIDNVASPA QKRKLFRGIL DGRRLANAGP ERNTRHTLEL KARVRRDGDG YRVSGEKFYS TGALFAHWVA VKAIDEEERA VMLFVERGAP GLRIVDDWSG FGQRTTASGT VLLDEVPVAG DMLIHNGLLA EIPSLQGAVS QLIQAAIDAG IAQAALDDAQ AFVRERSRPW IDAQVERASD ELYSIAEVGR LQIELHAANA LLEKAGQVLD EVAARPVDAE SAARASIAVA EAKVLSTEIS LAASEKLFKL AGSRATLAKF NLNRHWRNAR THTLHDPVRW KVHAVGDYYL NGARPARHSW I
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