Gene PA14_34020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34020 
Symbol 
ID4380429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3026648 
End bp3027073 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content72% 
IMG OID639325306 
Producthypothetical protein 
Protein accessionYP_790875 
Protein GI116050308 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.311323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0827701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAG CCCTGCCGCC GCTGTTCGAG CGCCTCAGCG CCGAGGCCGA CGAACGTCCC 
GCGTTCGACG ACCGGGCGCT GGCCGAGTCG GTCCGCGGCG AGCTGCTGCG CCTGCTCAAC
ACACGGCGCC CGGCGCATGC GCGCAGCGGC ATCCTCGCCT ACGGGCTCGC CGACTGGACC
GCCGTGCAAC GCCTGCGCGC CGAGGACCGG CGCCAGCTGG CACGCGAGGT GCGGGCGGCG
GTCGAGCATT TCGAGCCGCG CCTGCAACTG GCCGAGGTCG AGGTCGAACC TGACCCGGGC
AATCCGCAGC GCCTGCGTAT CCAGCTCGGT GGCCGCCTGC GCAGCGGGTC GCGCCTGATG
CCTGCGCTAT TCGTCATCGA ACAGGGCAAC GATGGCCTCG AGGTGCGCCA TGAGCGATTC
GATTGA
 
Protein sequence
MSGALPPLFE RLSAEADERP AFDDRALAES VRGELLRLLN TRRPAHARSG ILAYGLADWT 
AVQRLRAEDR RQLAREVRAA VEHFEPRLQL AEVEVEPDPG NPQRLRIQLG GRLRSGSRLM
PALFVIEQGN DGLEVRHERF D