Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34010 |
Symbol | |
ID | 4380430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3024871 |
End bp | 3026664 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639325305 |
Product | hypothetical protein |
Protein accession | YP_790874 |
Protein GI | 116050309 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.110029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.162624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT CGATTGATGC CGACCTGCTC GACTACTACC AGCGCGAGCT GACCTGGCTA CGGCACGCCG GCGGCGCCTT CGCCGAGCGC TATCCGAAGG TCGCCCGGCG CCTGCAACTG GCCCCCGGCG AATGCCCCGA CCCGCACGTC GAGCGTCTGC TGGAAGGTTT CTCGCTGCTC ACCGCGCGCC TGCAACGGCG CCTCGACGAC GACTACGCAG AGTTCAGCGA CGCCCTCCTC GAACAGCTCT ACCCCCTGGC GCTGCGCCCG CTGCCGTCCT GCGCGATCGT CCAGTTCGAA CCGGACCCGA CCCAGGGCAA CCTCGCCGAG GGCTACCGGC TGCCGCGCGA CACCGCGCTG TTCGTCACCA CCCGTGGCGG CGACAGCGTG CATTTCCGCA GCAGCGCCGA GGCGACCCTG TGGCCGCTGG CGATCGACGA GGCGACCCTG CTCGGCGGCG AGGAGGCACA AGCCCTGACC GGAGTCGGCG CCGCCCGCTC GGCGTTGCGC CTGAGCCTGC GCTGCCTGGG CGAGTACCGC TGGGACGAAC TGTCGATCGA GCGCCTGCGC ATCCACCTGG CGGCTTCGCC GATGGGCTGC GCGATCCTCT ACGACCTGCT CGCCGCGCAT GCCGTGCAGG TCATGGCGGG GGCGCCCGGC ACGCCGCCGG CGGCGCTCCG CGGACTGCCG GAGATCGTCG GCTTCGCCGC CGACGAGGCG CTGCTGCCGG AGGAAGACGG CGGACATCCG GGCCTGCGCC TGCTCGCCGA GTACTTCGCC TTCCCCGACA AGTTCCACTT CTTCGACCTG CCGCTGTCCG GCGCGCTCGC CGACGGACAG ACGCTCTACC TGTACCTGGT CTTCGATCGC GCACCGACGG CACGCCTGCA TTTGCAGGCG GAAGACTTCC AGCTCGGCTG CGCGCCGGCG ATCAACCTCT TTCCGCGGAC CTCGGAGCCG CTGCGCCCGG ACGGCACCCG CAGCGAGTAC CGCCTGGTCG CCGACAGTCA CCGCGAGAAC AGCGTGGAAA TCCATAGCAT CCGCGCCGTG CGCTCGGTTG CCGGGAGCAC CGTGCAGCCA GTCCCGGCCT ACTATGGCTG CCGCCACGAC AGCCACCTCG GCACGCTCTA CTGGCACGCC CGGCGCATCG CCGGGCTGAC CCCGAACCGG CTGGGCAGCG ACCTGCTGCT GAGCCTGGTG GATACCGGCT TCGACCCGTT GCGCGAGGCC CCGGCCTTCA GCCTGACCGC CGAGCTGCTA TGCACCAATC GCTATCTGGC CGAGCGCCTG GGTGCCGGCA CCGCGCTGGG CTTCGAACGG CCCGGGCCGG TCGCCGCCGC ACGCCTGCGC AACGCGCCCA GCGCGCAGAG CCAGCCGCGC CTGGACGGCC AGTCGCGCTG GAGACTGGTC TCGCAGCTGA CCCTCAACCA CCTCTCGCTG GTGGAAGGTC CGCGCGCCCT CGAAGCCCTG CGGGAAATCC TCGCCCTGCA CAACCTGCGC GACGACGCCA GCGCCCGCCG GCAGATAGAA GGGCTGCGGC AACTCGACTG CCAGCGGGTG GTGGCGCACG TCGGCGAGGA TGCCTGGCGC GGCTGGCGCA ATGGCCTGGA AATCCGCCTG CGACTCGATC CGCAACACTT CGTCGGCGCC AGCGGCGTGC TGTTCTCCGC CGTGCTGGCG CAGTTCTTCT CGCTGTATGC CACCGCCAAC CGCTTCGTGC GCACGGTCCT GGTGGAAGCC GACAAGGAGG TGAAGACATG GCAACCCCAG GCCGGCTCGC CGCTCTCCCT CTGA
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Protein sequence | MSDSIDADLL DYYQRELTWL RHAGGAFAER YPKVARRLQL APGECPDPHV ERLLEGFSLL TARLQRRLDD DYAEFSDALL EQLYPLALRP LPSCAIVQFE PDPTQGNLAE GYRLPRDTAL FVTTRGGDSV HFRSSAEATL WPLAIDEATL LGGEEAQALT GVGAARSALR LSLRCLGEYR WDELSIERLR IHLAASPMGC AILYDLLAAH AVQVMAGAPG TPPAALRGLP EIVGFAADEA LLPEEDGGHP GLRLLAEYFA FPDKFHFFDL PLSGALADGQ TLYLYLVFDR APTARLHLQA EDFQLGCAPA INLFPRTSEP LRPDGTRSEY RLVADSHREN SVEIHSIRAV RSVAGSTVQP VPAYYGCRHD SHLGTLYWHA RRIAGLTPNR LGSDLLLSLV DTGFDPLREA PAFSLTAELL CTNRYLAERL GAGTALGFER PGPVAAARLR NAPSAQSQPR LDGQSRWRLV SQLTLNHLSL VEGPRALEAL REILALHNLR DDASARRQIE GLRQLDCQRV VAHVGEDAWR GWRNGLEIRL RLDPQHFVGA SGVLFSAVLA QFFSLYATAN RFVRTVLVEA DKEVKTWQPQ AGSPLSL
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