| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33760 |
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| Symbol | |
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| ID | 4380452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2998496 |
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| End bp | 3000487 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639325283 |
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| Product | putative ATP-binding/permease fusion ABC transporter |
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| Protein accession | YP_790852 |
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| Protein GI | 116050331 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.267667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.000629117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAACG CCACGCACCC CGTCCCCCTG ATCGAACTGC GCGACATCCG CAAGCGCTAC
GGCGGCAATG GCACCCCGGA AGTCGAGGTA CTCAAGGGCG TATCGCTGTC GATCCACGCC
GGCGAGTTCG TCGCCATCGT CGGCGCCTCC GGCTCCGGCA AGTCGACCCT GATGAACATC
CTCGGCTGCC TCGACCGGCC CAGCTCCGGC AGCTACCACT TCGCCGGCCA CGACGTCGCC
GAACTGGACA GCGACGAGCA GGCCTGGCTG CGCCGCGAGG CATTCGGCTT CGTGTTCCAG
GGCTATCACC TGATCCCCTC CGCCTCGGCC CAGGAAAACG TCGAGATGCC GGCGATCTAC
GCCGGCATCC CGGCGAGCGA GCGGCACACC CGCGCGCGGG CCCTGCTCGA ACGCCTGGGC
CTGGCCGAGC GCACCGCCAA CCGTCCGCAC CAGTTGTCCG GCGGCCAGCA GCAGCGGGTG
TCGATCGCCC GCGCGCTGAT GAACGGCGGC CATATCATCC TCGCCGACGA ACCCACCGGC
GCCCTCGACA GCCACAGCGG CGCGGAAGTC ATGGCGCTGC TCGACGAGCT GGCCAGCCAG
GGCCACGTGG TGATCCTGAT CACCCACGAC CGCGACGTCG CCGCCCGCGC CAAGCGCATC
ATCGAGGTGC GCGACGGCGA GATCGTCAGC GACAGCGCCA ACGACGAGCG CCCGGCGCAA
CCGAGCGCCG GCGTCGAGCG CCACCTGCAG GCCGACGATC TCAGCCAGCG CCTCGCCGAG
GGCAGCAGCG AACCCTCGGG GGCCTGGCGC GCCGAACTGC TGGAGGCGGT GCGCGCCGCC
TGGCGGGTGA TGTGGATCAA TCGGTTCCGC ACCGCGCTGA CCCTGCTCGG GATCATCATC
GGCGTCGCCT CGGTGGTGGT CATGCTCGCC GTCGGCGAGG GCAGCAAACG CCAGGTGATG
GCGCAGATGG GCGCGTTCGG CTCGAACATC ATCTATCTCA GCGGCTACTC GCCGAACCCG
CGCGCGCCGA TGGGCATCGT CAGCAGCGAC GACGTCGCCG CCATCGCCAC CCTGCCCCAG
GTGAAGAAGG TCATGCCGGT GAACGGCGGC GAGCTGGTGG TGCGCTACGG CAACATCGAC
TACCACGCCT ACGTCGGCGG CAACAACACC GACTTCCCGG AAATCCTCAA CTGGCCGGTG
GCCGAGGGCA GCTACTTCAC CGAGCGCGAC GAAGACGCCG CCACCACGGT CGCGGTGATC
GGCTACAAGG TGCGCAAGAA GCTGTTCGGC AGCGCCAACC CGATCGGCCG CTACATCCTC
ATCGAGAACG TGCCGTTCCA GGTCATCGGC GTGCTCGCCG AGAAAGGCTC CAGCTCCGGC
GACAAGGATG CCGACAACCG CATCGCCATC CCCTACTCCG CTGCCAGCAT CCGCCTGTTC
GGCACGCGCA ACCCCGAGTA CGTGATCATC GCCGCCGCCG ACGCCCAGCG CGTGCACCAG
GCCGAACGCG CCATCGACCA GTTGATGCTG CGCCTGCACC GCGGCCAGCG CGACTACGAG
CTGACCAACA ACGCGGCGAT GATCCAGGCC GAGGCGAAGA CCCAGAACAC CCTGTCGCTG
ATGCTCGGCT CGATCGCCGC GATCTCCCTG CTGGTGGGCG GGATCGGCGT GATGAACATC
ATGCTCATGA CCGTGCGTGA ACGCACTCGC GAGATCGGCA TCCGCATGGC CACCGGCGCC
CGCCAGGGCG ATATCCTCCG CCAGTTCCTC ACCGAAGCGG CGATGCTCTC GGTGGTCGGC
GGCCTGGCCG GGATCGCCCT GGCCCTGTGC ATCGGCGGCG TGCTGCTGCT CGGCCAGGTC
GCGGTGGCCT TTTCCCTGTC GGCCATCGTC GGCGCCTTCA GTTGCGCGCT GGTCACCGGC
CTGGTGTTCG GCTTCATGCC GGCGCGCAAG GCCGCCCAGC TGGACCCGGT GGCCGCCCTG
GCCAGCCAAT GA
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| Protein sequence | MENATHPVPL IELRDIRKRY GGNGTPEVEV LKGVSLSIHA GEFVAIVGAS GSGKSTLMNI
LGCLDRPSSG SYHFAGHDVA ELDSDEQAWL RREAFGFVFQ GYHLIPSASA QENVEMPAIY
AGIPASERHT RARALLERLG LAERTANRPH QLSGGQQQRV SIARALMNGG HIILADEPTG
ALDSHSGAEV MALLDELASQ GHVVILITHD RDVAARAKRI IEVRDGEIVS DSANDERPAQ
PSAGVERHLQ ADDLSQRLAE GSSEPSGAWR AELLEAVRAA WRVMWINRFR TALTLLGIII
GVASVVVMLA VGEGSKRQVM AQMGAFGSNI IYLSGYSPNP RAPMGIVSSD DVAAIATLPQ
VKKVMPVNGG ELVVRYGNID YHAYVGGNNT DFPEILNWPV AEGSYFTERD EDAATTVAVI
GYKVRKKLFG SANPIGRYIL IENVPFQVIG VLAEKGSSSG DKDADNRIAI PYSAASIRLF
GTRNPEYVII AAADAQRVHQ AERAIDQLML RLHRGQRDYE LTNNAAMIQA EAKTQNTLSL
MLGSIAAISL LVGGIGVMNI MLMTVRERTR EIGIRMATGA RQGDILRQFL TEAAMLSVVG
GLAGIALALC IGGVLLLGQV AVAFSLSAIV GAFSCALVTG LVFGFMPARK AAQLDPVAAL
ASQ
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