Gene PA14_32690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_32690 
SymbolgtdA 
ID4380554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2838300 
End bp2839361 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID639325198 
Productgentisate 1,2-dioxygenase 
Protein accessionYP_790767 
Protein GI116050414 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID[TIGR02272] gentisate 1,2-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000796263 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0000100367 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATAACG ACAATTCCAC CGAGAAGCGC GCCGACTTCT ATCGACGCAT CCGCCAGCAG 
CACCTCACCC CGCTCTGGGA AGCCCTGCAC AACCTGGTCC CGGCGCAACC CGCCGGCGGC
TGCCAGGCGG CGCTGTGGCG CTATCGCGAA CTGCGCCCGT TCCTGCTCGA GGCAGGCGAC
CTGATCAGCG CCGAGGAAGC GGTGCGCCGC GTGCTGGTGC TGGAGAACCC GGACCTTCCC
GGCCAGTCGG CGATCACCCC GAGCCTCTAC GCCGGCCTGC AACTGATCCT GCCGGGCGAG
ATCGCCCCCA GCCACCGGCA CACCCAGTCG GCCCTGCGCT TCGTCGTCGA GGGCTACGGC
GCCTACACCT CGGTGGACGG CGAACGCACC CGCATGGAGC CGGGCAACTT CATCATCACT
CCGTCCTGGA CCTGGCACGA CCACGGCAAC CGCCCCGCCG CGGAAGGCGG CGAGCCGGTG
GTCTGGCTGG ACGGCCTGGA CATCCCGATG CTGCGTTTCT TCGGCGCCAC CTTCGCCGAG
AGCTACGGCG AACCGGTGCA GCCGTTGCGA CGTGGCGAAG GCGACAGCCT CGCCCGCTAC
GGCAGCAACA TGCTGCCGCT GCGCCACCAG CCGACGACGC CGACCTCGCC GCTGTTCAGT
TACCCCTACG CGCGCAGCCG CGAGGCCCTC GAGCGCCTGG CGCGCCTCGA ACGGCCCGAT
CCCTGGGAAG GCCACAAGCT GCGCTACGTC AACCCGGCCA CCGGCGGCTG GGCCATGCCG
ACCATCGCCA CCTGCCTGCA ACTGCTGCCG GCCGGCTTCC TCGGCCAACC CGCGCGCAGC
ACCGACGCCA GCGTCTATTC GGTGGTGGAA GGCAGCGGCG TGGCGCAAAT CGGCGGCCGG
CGCTTCGCCT TCGAGGCCAA GGATCTGTTC GTCGTGCCCT CCTGGGCCGA GCTGCGCCTG
GAAGCCGGCG CCACCGACTG CGTGCTGTTC AGTTTCTCCG ACCGTCCTGT GCAGCAGGCG
CTCGGCATCC TCCGCGAATC CCGCGAACCC CTCGCCCACT GA
 
Protein sequence
MHNDNSTEKR ADFYRRIRQQ HLTPLWEALH NLVPAQPAGG CQAALWRYRE LRPFLLEAGD 
LISAEEAVRR VLVLENPDLP GQSAITPSLY AGLQLILPGE IAPSHRHTQS ALRFVVEGYG
AYTSVDGERT RMEPGNFIIT PSWTWHDHGN RPAAEGGEPV VWLDGLDIPM LRFFGATFAE
SYGEPVQPLR RGEGDSLARY GSNMLPLRHQ PTTPTSPLFS YPYARSREAL ERLARLERPD
PWEGHKLRYV NPATGGWAMP TIATCLQLLP AGFLGQPARS TDASVYSVVE GSGVAQIGGR
RFAFEAKDLF VVPSWAELRL EAGATDCVLF SFSDRPVQQA LGILRESREP LAH