Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30960 |
Symbol | |
ID | 4385902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2688485 |
End bp | 2690485 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325066 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_790635 |
Protein GI | 116050546 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000501937 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.70004e-21 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TATTCGGCAT CGTGATCGCC GGAGTGTGGG GCGCCACACA ATGGACAGCA GCAGCCCTTG GCTATCAGCT ACGCCTTGGC TCGCCCTGGT TCGATTTTCT TGGCACGCCG ATCTACTACC CGTGGAAGCT GTTTGAGTGG TGGTTCTCTT ACGGCGCCTA TACCCCGGAA ATCTTCGACA CGGGCGGAGC CATCGCCGGT GGCAGCGGCA TGGTCGCCGT GGCCGTCGCC ATTGCCATGT CGGTCTGGCG CTCGCGACAG GCACGCCTGG TCACGACCTA CGGTTCGGCC CGTTGGGCGA ATGCGCAGGA CATTCGCAAG GCGGGCCTCA CGCAGCCGGT CGGCGTGTTC CTCGGCCAGT ACGATCGCCA GTACCTGCGC CATGAAGGGC CAGAGCATGT TCTGACCTTC GCGCCCACAC GCTCGGGCAA GGGCGTCGGC CTGGTGGTTC CCACCTTGTT GAGCTGGCCG GCCTCGGCGG TCATCCACGA CATCAAGGGG GAGAACTGGC AGATCACCGC CGGCTGGCGC AGCCGTTTCA GCCACTGCCT GCTGTTCAAC CCGACCGATG CAAAGTCGGC GGCCTACAAC CCGCTGCTGG AGGTACGGCG CGGCGCGCAT GAAGTGCGCG ACGTGCAGAA CATCGCGGAC ATTCTAGTCG ATCCCGAAGG CGCGCTGGAG AAGCGCAACC ATTGGGAGAA GACCTCGCAC GCGCTGCTGG TCGGGGCGAT CCTGCATGTG CTCTATGCGG GCGAGGACAA GACGCTGCGC GGCGTCGCCA ACTTCCTCAG CGACCCGGCC AGCCCCTTCG AGCTGACCTT GCACCGGATG ATGACCACGC CCCACCTGGG CGATGGGCCG CATCCGGTGG TGGCATCCGC TGCGCGCGAA GTGCTCAACA AGTCGGACAA CGAGCGTTCT GGCGTCTTGA GCACCGCCAT GTCGTTCCTC GGCCTGTACC GCGATCCCAC GGTGGCCGAA GTCACGTCGC GCTGCGACTG GCGCATTGCC GACCTCATAT CCGCCGAGCA TCCCGTATCG CTGTACCTGG TGGTGCCGCC TTCGGACATT TCGCGCACCA AGCCGCTCAT CCGCCTGATC CTCAACCAGA TCGGGCGGCG CTTGACCGAA TCGCTCGACG GCTCTGACGG CATCGAACGC CGCCACAAGC TGCTGCTGAT GCTCGATGAG TTTCCGGCCC TGGGCCGGCT CGACTTCTTC GAGACGGCGC TCGCATTCAT GGCGGGCTAC GGCATCCGCA GCTTCTTGAT TGCGCAGTCG CTCAACCAGA TCGACAAAGC CTACGGCCAG AACCATTCGA TTCTGGACAA CTGCCATGTG CGCGTGACGT TCGCCACGAA CGACGAGCGC ACCGCCAAAC GCATCTCCGA GACGCTGGGC ACGGCCACCG AGCTGCGCGC ACAGCGCAAC TACGCGGGCC ACCGGCTCGC GCCGTGGCTG GGGCACCTCA TGGTGTCGCG CCAGGAGACG GCCCGCCCGC TGCTGACACC GGGCGAAGTC ATGCAGCTTC CGCCCGATGA GGCGGTGGTG ATGGTGTCCA GCGTGGCGCC GATCAAGGCC CGGAAGCTGC GCTATTACGC CGACGCCAAT TTCAAGCGGC GCGTGTTGCC GCCGCCCGCG CTGGCGGACT GCCAATACGC CGACGCGCCG CCGCTGCGCG CCGACGACTG GAGCGGGCTG GCAATCCCAC CAACGCCCAC CGCACCAGCC ACGGCATCCG CCGATGGCCT CGGTTCCGCC GACGACGGCG GCCCACGCCG TCAGCCCGAA CTCTCCGAAG CCGTCGCCTA CGACCCCGAG CTGGCCGCGC CCGCGGCCGA CCTCGGTTTG CTCGATGACG ACGACGACCT GCCGCTTCCC CTTCCTCGCC AGCTTGATCC GGCCATGCAG CGCACGGCCC GGCTGGCTTC CCTCGACCCC AACGACGGAA TTGAGCTATG A
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Protein sequence | MQGTNVLFGQ IAVVFGIVIA GVWGATQWTA AALGYQLRLG SPWFDFLGTP IYYPWKLFEW WFSYGAYTPE IFDTGGAIAG GSGMVAVAVA IAMSVWRSRQ ARLVTTYGSA RWANAQDIRK AGLTQPVGVF LGQYDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG ENWQITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA SPFELTLHRM MTTPHLGDGP HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLISAEHPVS LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIER RHKLLLMLDE FPALGRLDFF ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA RKLRYYADAN FKRRVLPPPA LADCQYADAP PLRADDWSGL AIPPTPTAPA TASADGLGSA DDGGPRRQPE LSEAVAYDPE LAAPAADLGL LDDDDDLPLP LPRQLDPAMQ RTARLASLDP NDGIEL
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