Gene PA14_30960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30960 
Symbol 
ID4385902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2688485 
End bp2690485 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content66% 
IMG OID639325066 
Productconjugal transfer coupling protein TraG 
Protein accessionYP_790635 
Protein GI116050546 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3505] Type IV secretory pathway, VirD4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000501937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.70004e-21 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TATTCGGCAT CGTGATCGCC 
GGAGTGTGGG GCGCCACACA ATGGACAGCA GCAGCCCTTG GCTATCAGCT ACGCCTTGGC
TCGCCCTGGT TCGATTTTCT TGGCACGCCG ATCTACTACC CGTGGAAGCT GTTTGAGTGG
TGGTTCTCTT ACGGCGCCTA TACCCCGGAA ATCTTCGACA CGGGCGGAGC CATCGCCGGT
GGCAGCGGCA TGGTCGCCGT GGCCGTCGCC ATTGCCATGT CGGTCTGGCG CTCGCGACAG
GCACGCCTGG TCACGACCTA CGGTTCGGCC CGTTGGGCGA ATGCGCAGGA CATTCGCAAG
GCGGGCCTCA CGCAGCCGGT CGGCGTGTTC CTCGGCCAGT ACGATCGCCA GTACCTGCGC
CATGAAGGGC CAGAGCATGT TCTGACCTTC GCGCCCACAC GCTCGGGCAA GGGCGTCGGC
CTGGTGGTTC CCACCTTGTT GAGCTGGCCG GCCTCGGCGG TCATCCACGA CATCAAGGGG
GAGAACTGGC AGATCACCGC CGGCTGGCGC AGCCGTTTCA GCCACTGCCT GCTGTTCAAC
CCGACCGATG CAAAGTCGGC GGCCTACAAC CCGCTGCTGG AGGTACGGCG CGGCGCGCAT
GAAGTGCGCG ACGTGCAGAA CATCGCGGAC ATTCTAGTCG ATCCCGAAGG CGCGCTGGAG
AAGCGCAACC ATTGGGAGAA GACCTCGCAC GCGCTGCTGG TCGGGGCGAT CCTGCATGTG
CTCTATGCGG GCGAGGACAA GACGCTGCGC GGCGTCGCCA ACTTCCTCAG CGACCCGGCC
AGCCCCTTCG AGCTGACCTT GCACCGGATG ATGACCACGC CCCACCTGGG CGATGGGCCG
CATCCGGTGG TGGCATCCGC TGCGCGCGAA GTGCTCAACA AGTCGGACAA CGAGCGTTCT
GGCGTCTTGA GCACCGCCAT GTCGTTCCTC GGCCTGTACC GCGATCCCAC GGTGGCCGAA
GTCACGTCGC GCTGCGACTG GCGCATTGCC GACCTCATAT CCGCCGAGCA TCCCGTATCG
CTGTACCTGG TGGTGCCGCC TTCGGACATT TCGCGCACCA AGCCGCTCAT CCGCCTGATC
CTCAACCAGA TCGGGCGGCG CTTGACCGAA TCGCTCGACG GCTCTGACGG CATCGAACGC
CGCCACAAGC TGCTGCTGAT GCTCGATGAG TTTCCGGCCC TGGGCCGGCT CGACTTCTTC
GAGACGGCGC TCGCATTCAT GGCGGGCTAC GGCATCCGCA GCTTCTTGAT TGCGCAGTCG
CTCAACCAGA TCGACAAAGC CTACGGCCAG AACCATTCGA TTCTGGACAA CTGCCATGTG
CGCGTGACGT TCGCCACGAA CGACGAGCGC ACCGCCAAAC GCATCTCCGA GACGCTGGGC
ACGGCCACCG AGCTGCGCGC ACAGCGCAAC TACGCGGGCC ACCGGCTCGC GCCGTGGCTG
GGGCACCTCA TGGTGTCGCG CCAGGAGACG GCCCGCCCGC TGCTGACACC GGGCGAAGTC
ATGCAGCTTC CGCCCGATGA GGCGGTGGTG ATGGTGTCCA GCGTGGCGCC GATCAAGGCC
CGGAAGCTGC GCTATTACGC CGACGCCAAT TTCAAGCGGC GCGTGTTGCC GCCGCCCGCG
CTGGCGGACT GCCAATACGC CGACGCGCCG CCGCTGCGCG CCGACGACTG GAGCGGGCTG
GCAATCCCAC CAACGCCCAC CGCACCAGCC ACGGCATCCG CCGATGGCCT CGGTTCCGCC
GACGACGGCG GCCCACGCCG TCAGCCCGAA CTCTCCGAAG CCGTCGCCTA CGACCCCGAG
CTGGCCGCGC CCGCGGCCGA CCTCGGTTTG CTCGATGACG ACGACGACCT GCCGCTTCCC
CTTCCTCGCC AGCTTGATCC GGCCATGCAG CGCACGGCCC GGCTGGCTTC CCTCGACCCC
AACGACGGAA TTGAGCTATG A
 
Protein sequence
MQGTNVLFGQ IAVVFGIVIA GVWGATQWTA AALGYQLRLG SPWFDFLGTP IYYPWKLFEW 
WFSYGAYTPE IFDTGGAIAG GSGMVAVAVA IAMSVWRSRQ ARLVTTYGSA RWANAQDIRK
AGLTQPVGVF LGQYDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA SPFELTLHRM MTTPHLGDGP
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLISAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIER RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA
RKLRYYADAN FKRRVLPPPA LADCQYADAP PLRADDWSGL AIPPTPTAPA TASADGLGSA
DDGGPRRQPE LSEAVAYDPE LAAPAADLGL LDDDDDLPLP LPRQLDPAMQ RTARLASLDP
NDGIEL