Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30870 |
Symbol | |
ID | 4385910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2680695 |
End bp | 2681399 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325058 |
Product | conjugal transfer protein TrbF |
Protein accession | YP_790627 |
Protein GI | 116050554 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3701] Type IV secretory pathway, TrbF components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000177985 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 2.25295e-22 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGATTCA AGAAACCGCA GGTGCGCTAC GCCGACACGC CGCAGCCTGC CACGCCGTAC CAAGCTGCCG GCCAGGTGTG GGACGACCGT ATCGGCTCGC CGCGCGTGCA GGCGAAGAAC TGGCGCTTGA TGGCGTTCGG GTGCCTGACG CTCGCGCTGC TGATGGCCGG CGGCCTGGTG TGGCGCTCGG CGCAGTCCAT CGTGACGCCC TATGTGGTGG AGGTGGACAA CGCGGGCCAG GTGCGCGCTG TGGGCGAAGC CGCCACGCCG TACCGCCCCA GCGATGCACA GACGGCGCAC CACATTGCGC GCTTCGTGAC GCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTCGTCCGC CAAAACTGGC TGGACGCCTA CGACTACACG ACCGACAAGG GCGCGGCCGT GCTCAACGAC TACGCGCGGG TCAACGACCC GTTCGCACGC ATCGGCAAGG AGTCGGTGAC GGTGCAGATC ACCAGCGTCG TGCGCGCCAG CGACACGTCT TTCAACGTGC GCTGGACGGA ACGGCGCTAC GTCAACGGCG CCGCGGCGGG CCTGGAGCGG TGGACGGCGG TGGTGTCCAT CGTGCTCCAG CCACCGCGCA CCGAAGAACG CCTGCGCAAG AACCCGCTGG GCATCTACGT CAACGGCCTG TCGTGGAGCC GTGAACTGGA TTCTTCCGAA GGAGCAAAGC CATGA
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Protein sequence | MRFKKPQVRY ADTPQPATPY QAAGQVWDDR IGSPRVQAKN WRLMAFGCLT LALLMAGGLV WRSAQSIVTP YVVEVDNAGQ VRAVGEAATP YRPSDAQTAH HIARFVTLVR SLSIDPIVVR QNWLDAYDYT TDKGAAVLND YARVNDPFAR IGKESVTVQI TSVVRASDTS FNVRWTERRY VNGAAAGLER WTAVVSIVLQ PPRTEERLRK NPLGIYVNGL SWSRELDSSE GAKP
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