Gene PA14_30200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30200 
SymbolcspD 
ID4380653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2616438 
End bp2616710 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content63% 
IMG OID639325000 
Productcold-shock protein CspD 
Protein accessionYP_790572 
Protein GI116050609 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID[TIGR02381] cold shock domain protein CspD 


Plasmid Coverage information

Num covering plasmid clones100 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCG GTAAGGTCAA GTGGTTCAAC AACGCCAAGG GCTACGGGTT CATCCTGGCC 
GAGGGCCGAG ATGAGGACCT GTTCGCCCAT TACTCGGCCA TTCAGATGGA CGGTTACAAG
ACACTCAAGG CGGGCCAGCC GGTCAATTTC GAGATCATCC AGGGACCGAA GGGACTGCAT
GCCATCAACA TCAGCCCCGC CACCGCGACA ACCGCCGCAC CCTCCGCCCC CGCCCCGCAG
GAAGAGCCGC AGGCGACGCC CATCGAAGCC TGA
 
Protein sequence
MLSGKVKWFN NAKGYGFILA EGRDEDLFAH YSAIQMDGYK TLKAGQPVNF EIIQGPKGLH 
AINISPATAT TAAPSAPAPQ EEPQATPIEA