Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_29260 |
Symbol | |
ID | 4384667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2531797 |
End bp | 2532690 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639324927 |
Product | putative transcriptional regulator |
Protein accession | YP_790499 |
Protein GI | 116050681 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTG CCATAGACAG AACAAAGGGC GACCAATCCA CGCCAGGGAA CATCATAAGG GGAGAAGGGT ACGCCTTGAT TCGCAATAGT GAGGCGACTC CCGATCCGGA CAAGGTGATC CATATTCCTT GTGCCGATTC GTTTTCCGTC ATCGTGCAGT TGCGCGATTT CAATTCCCAT CGTCTCTGGA ATGGAAACAA ACTGGTTTTC GATGGCGGAC ATCCACGGAA AAGTATCTCC ATCGCCTATC TTGGCGATGA AATAAAGTGC CAGCACCGGA CAACTTACGA CAATGTCCGC TTCATGTTGC CGCGCGCTTC GATAAAGGAG TTTCTCTACG AAGAAGGGCA ACGCGCGTCC GCCGAGCCGG AGCGGATCAT CGGTGTCGAC GATCCGGTGG TCTATCACCT GGCGCTGGCG CTGCTGCCCA GCTTCGCCAG GGCGGGCGAG CGCAACGAAC TGTTCATCGA ACAGGTCATG CTGGCGCTGT TGACCCACGT TCAGGATCGC TTCGCTTCGA CCCAGGTCCC GGTCTGCACC GGCAAGGGCC TGGCGCCCTG GCAATTGCGC AGGGCCAAGG AGCTGATCGC CGGGCATCTG GCCGAGGGCG TATCGGTGGC GCGCCTGGCC GAGGAGTGCG GGCTCTCGCG CAGCTATTTC ACCAAGGCCT TCAAGTGCAG CACCGGTGTT TCGCCCCACG AATGGCTGAT GCGCATGCGC GTCGACCGGG CCAAGGAGCT GATGCTGGGC AGCGACGAAC CGCTTTCGCA GATCGGCGTC GCCTGCGGCT TTTCCGACCA GCCGCATTTC TCGCGGATCT TTCTCCGGCT GGCCGGCGCC TCGCCCTCGA CCTGGCGTCG GGTCAAGCGG CAGCGCACCG ACGCAGCGCT CTGA
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Protein sequence | MTVAIDRTKG DQSTPGNIIR GEGYALIRNS EATPDPDKVI HIPCADSFSV IVQLRDFNSH RLWNGNKLVF DGGHPRKSIS IAYLGDEIKC QHRTTYDNVR FMLPRASIKE FLYEEGQRAS AEPERIIGVD DPVVYHLALA LLPSFARAGE RNELFIEQVM LALLTHVQDR FASTQVPVCT GKGLAPWQLR RAKELIAGHL AEGVSVARLA EECGLSRSYF TKAFKCSTGV SPHEWLMRMR VDRAKELMLG SDEPLSQIGV ACGFSDQPHF SRIFLRLAGA SPSTWRRVKR QRTDAAL
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