| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_28920 |
|---|
| Symbol | |
|---|
| ID | 4380736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2500890 |
|---|
| End bp | 2502773 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639324896 |
|---|
| Product | putative chaperone |
|---|
| Protein accession | YP_790468 |
|---|
| Protein GI | 116050712 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.325759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00000775064 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCG GGGCAATATG CTGTGGCCAC GACACACGCT GTGAGCGACT ATCGATGCCA
GGGACTGCAC TGTTCGAAAA GCCACGCTGG TTGCGCGACC TCCTGCGCTT CCTGCCCCTC
AAGAGTCAAT TCGTCCTCTC CGGGAACATC CGCGACCTGC AAGCCTGTGA AGTGGTGCCG
GGTACGGTCA CCGCGCAGAG CTTCAACCAG ACCCTCTGCG ACGCCCTGCT GGACGCCGGC
TACACCCAGG TGCTGGCCTG GGATCCGCTG GCCGGGTTCC GCGTGCTCGG CCGGCCGGGC
AGCGAGGCGG GCGCCACTCC GCAGGTGCTT CTCGACCTCG GCCTAACCCC GGTGGACGGC
GCCGCGCCGG CCGGCACCGA CCTGCTCGGC GCAACCCTGC AACGCCTGGT CAACCGTAGC
GGCGAGCCGA TCGCCCTGAT CGTCGACTTC GCCTCGCGCC TGGCGGTGCG CAACGACGCC
CTGAGCGCCG CCGAGCATCA GTTGTTCACC CAGGCCCTGG TGCTCTCCCA CCAGGCCCGC
AGCCGTCCCG CCGGGGAACA GCGCAAACCG TTCTTCAACA GCGTGCTGTG GGTGGTGGAA
AAGGAAGGCG ACCTGCCCGA CTGGCTGCTG GTGGACAACC CGCGCCTGCG CCATATCCCG
GTGTCGAAGC CCGACCAGCC GGCGCGCCGG GCCCTGGCCC CGGCGCTGCT CCGCGGGCTC
GGCGGCGCGG GCGTCGCCGA GGAGGCCCTG CAACAGGCCG CCGCAACCTT CGTCGAGAAC
ACCGAAGGCC TGCTGCTCCT CGATCTCAAC GCCATCGTCC AACTGGCGCG CGTGGAAGGC
CTGGCCATGG AACGCATCGC CGACGCCGTG CGCCGCTACA AGGTCGGCGT CACCGAAGAC
CCCTGGCTGA AGATCGACCG CCAGCGCATC CGCCAGGCCG ACGAGATCGT CCGCCGCCGG
GTCAAGGGCC AGCAGCACGC GGTGACCCAC ATGCTGGACA TCGTCAAGCG CGCGATGACC
GGGGTCGGCG CCAGCCGCAA GGGCAACCGC CCGCGCGGCG TGGCCTTCCT CGCCGGGCCC
ACCGGGGTCG GCAAGACCGA GCTGGCGAAG ACCGTCACCA GCCTGCTGTT CGGCGACGAG
AGCGCCTACA TCCGCTTCGA CATGTCCGAG TTCAGCGCCG AGCATGCCGA CCAGCGCCTG
ATCGGCGCGC CGCCCGGCTA CGTCGGCTAC GACGTCGGCG GCGAACTGAC CAACGCGATC
CGCGAAAAAC CCTTCAGCGT GGTGCTCTTC GACGAGATCG AGAAAGCCCA CCCCCGGATC
CTCGACAAGT TCCTGCAGAT CCTCGACGAC GGCGTGCTCA CCTCCGGGCG CGGCGATCGC
GTGTACTTCT CCGAGGCGCT GATCGTGTTC ACCTCGAACC TGGGCATCTA CCGCCAGGGG
GAGAACGGCG AACGGGTCGC CAACGTGCTC CCCGGCGAAT CCTTCGAGGC GGTGCAGGGC
AAGGTCCACG GCGAGATCGA GCGCTACTTC AAGCTGGTTC TCAACCGCCC GGAAATCCTC
AACCGGATCG GCGAGAACAT CATCGTCTTC GACTTCATCC GCGCCGACGT CGCCGAGCAG
ATCTTCACCC AGATGGTCGA CGGCACCTTC GCTGACCTCC GCGAGCAGCG CCTCGTCATC
GAGCTGGCCG AAGCGCCGCG CCAGGCGCTG CACGACCTCT GCCTGGGCGA CCTGTCCAAC
GGCGGCCGCG GCATCCGCAA CCAGCTCGAA GCGCGCCTGC TCAACCCGTT GTCGCGAGCA
CTGTTCGACC AGGACGCGCA GCCGGGCGAG CGCTTCCTGA TCAGCGCCCT GGACGCCGAC
GGCCTGACCC TGGAACGCCG CTGA
|
|---|
| Protein sequence | MALGAICCGH DTRCERLSMP GTALFEKPRW LRDLLRFLPL KSQFVLSGNI RDLQACEVVP
GTVTAQSFNQ TLCDALLDAG YTQVLAWDPL AGFRVLGRPG SEAGATPQVL LDLGLTPVDG
AAPAGTDLLG ATLQRLVNRS GEPIALIVDF ASRLAVRNDA LSAAEHQLFT QALVLSHQAR
SRPAGEQRKP FFNSVLWVVE KEGDLPDWLL VDNPRLRHIP VSKPDQPARR ALAPALLRGL
GGAGVAEEAL QQAAATFVEN TEGLLLLDLN AIVQLARVEG LAMERIADAV RRYKVGVTED
PWLKIDRQRI RQADEIVRRR VKGQQHAVTH MLDIVKRAMT GVGASRKGNR PRGVAFLAGP
TGVGKTELAK TVTSLLFGDE SAYIRFDMSE FSAEHADQRL IGAPPGYVGY DVGGELTNAI
REKPFSVVLF DEIEKAHPRI LDKFLQILDD GVLTSGRGDR VYFSEALIVF TSNLGIYRQG
ENGERVANVL PGESFEAVQG KVHGEIERYF KLVLNRPEIL NRIGENIIVF DFIRADVAEQ
IFTQMVDGTF ADLREQRLVI ELAEAPRQAL HDLCLGDLSN GGRGIRNQLE ARLLNPLSRA
LFDQDAQPGE RFLISALDAD GLTLERR
|
|---|
| |