Gene PA14_28830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28830 
Symbol 
ID4380742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2488133 
End bp2489428 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content56% 
IMG OID639324889 
Producthypothetical protein 
Protein accessionYP_790461 
Protein GI116050718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000708644 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000000000585098 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAGCA TCAGAGCCAA GGATCGCGAT GCGGTCATTC AATCCCTGCG AGCCGGTGTT 
GTTCCGCGGG CAGGCCAACA CCTGATCCAG GTCGGACGTG CCGGTGAACT CGAAGCTCTC
ATTCGTGACG TTGAGCGTTT GGCCGAGAGC GGCTCCGCAT TCCGGGTAGT GATTGGTGAA
TATGGTGCGG GTAAGACATT CTTCCTCAAT CTGGTGCGTT CCATTGCAAT GGAACGCAAG
CTCGTCACCA TGCATGCGGA CTTGAACCCG GATCGCCGCC TACACGCTAC TGGTGGGCAA
GCACGTTCGC TGTATGCCGA GCTAGCGAAG AACATGGCTA CCCGTACTAA GCCAGATGGC
GGTGCTTTGC AGGGAGTTGT CGAGAGGTTT ATCTCTCAGG CTAAGACCGA GGCCAAGGCA
TCCGGCAAAG ACAGCGAGGT AGTTATTCGT GAGCATCTCG CCCAATTGAC CGAGATGGTT
AATGGCTACG ATTTTGCCGA GGTGATCGCT GCTTACTGCA AAGGTTTTGA AGAAGGCAAC
GAGCAGCTAA AGGCTGAAGC GATTCGTTGG TTGCGTGGTG AGTTCACCAC AAGAACCGAT
GCGCGATCCG CTCTGGGGGT GCGAACCATT GTCGACGATG CGTCCGTCTA CGATCAGCTC
AAGCTGCTTG CTCGGTTTGT CCGGCTGGCA GGCTTCAGTG GTCTGATGGT GTGCCTTGAT
GAGCTGGTCA ACTTGTACAA GCTCTCCAAT ACACAGGCTC GTAACGCTAA CTACGAGCAG
ATCCTGCGTA TCCTGAACGA CTCTCTGCAG GGGACAGCAG AGGGGCTTGG TTTTGTGCTG
GGGGGGACAC CCGAGTTCCT GATGGATACT CGCCGTGGCC TTTACAGCTA TCCGGCCCTG
CAGTCGCGTC TAGCGGAAAA TAGTTTCGCC AAGTCCGGGC TGGTGGATCT CTCCGGACCT
GTTATCCGGC TCGTCAGCCT GACACCTGAG GATTTCTACG TGCTGCTCCA GAAACTACGC
CATGTCTATG CTGCGGGTGA TAGCCAGCGG TACTTGCTGC CTGATGAGGC ATTGCCGCTG
TTCATGGGGC ACTGCAATCA GCGGCTGGGA GAGGCCTACT TCCGTACCCC GAGGACTACC
ATCACCGCAT TCATTAACCT TCTGGCGGTG TTGGAGCAGA ACCCTGGAAC CGACTGGCGA
AGCCTCCTGG GTGCTGTAGA AATTGCGCCG GATAGAGGTG GCGAGGCCGA CACTCAAGTA
GATGCTGACG ATGAGCTTGC CACCTTCCAG CTCTGA
 
Protein sequence
MSSIRAKDRD AVIQSLRAGV VPRAGQHLIQ VGRAGELEAL IRDVERLAES GSAFRVVIGE 
YGAGKTFFLN LVRSIAMERK LVTMHADLNP DRRLHATGGQ ARSLYAELAK NMATRTKPDG
GALQGVVERF ISQAKTEAKA SGKDSEVVIR EHLAQLTEMV NGYDFAEVIA AYCKGFEEGN
EQLKAEAIRW LRGEFTTRTD ARSALGVRTI VDDASVYDQL KLLARFVRLA GFSGLMVCLD
ELVNLYKLSN TQARNANYEQ ILRILNDSLQ GTAEGLGFVL GGTPEFLMDT RRGLYSYPAL
QSRLAENSFA KSGLVDLSGP VIRLVSLTPE DFYVLLQKLR HVYAAGDSQR YLLPDEALPL
FMGHCNQRLG EAYFRTPRTT ITAFINLLAV LEQNPGTDWR SLLGAVEIAP DRGGEADTQV
DADDELATFQ L