Gene PA14_28800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28800 
Symbol 
ID4380745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2479279 
End bp2480274 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content58% 
IMG OID639324886 
Producthypothetical protein 
Protein accessionYP_790458 
Protein GI116050721 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000287413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000000000406133 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGAAAAT ACCAGCCACC GTTGACGTTA ACGCCACGCA TGTTGGCGCT GGCTGCCGAG 
ATTGGGGAGC GTGTTGGGCA TTTGTCCGCT CTGCATGAAG GGGCGCTGAC GCCGCAACTG
CGTCGGGGTA ACCGCATCCG TACTATCCAG GCGTCACTCG CTATTGAGAA CAACACGTTA
AGCGTCGAGC AGGTCACTGC TGTGTTGGAT GGCAAGCGTG TGCTTGGTTT GCCGCGTGAA
ATTCAGGAAG TGCGCAATGC CTTTTCAGCC TACGAGGTGA TGCCCGAGTG GCAACCGAGT
TTGCGTGATG ATTTACTGGC AGCCCACGCG CTGCTGATGC ACGGGCTGAT CGATGATGCC
GGTAGCTATC GGCGCGGGGG TGTAGGCATC TATCGAGGAG AACGTTTGCT GCACATGGCA
CCACCGGCCA ACCGGGTTCC GCAGTTGATG GACGATTTGC TGGCATGGCT GAGCCGCTGC
GAGCTGCATC CACTGATCGC CAGTTGCGTG TTCCATTACG AGTTCGAGTT CATCCACCCC
TTCGCAGATG GCAATGGGCG AATGGGGCGC CTATGGCAAA CCTTGATACT CAGCCAATGG
CGAGCGGTTC TTGCGTATTT GCCCGTCGAG AGTGTGATTC GCGAGCAGCA GGATGCTTAT
TACGAGGCAT TGGCTGTTTC TGACAAGGCA GCAGAGGCGG CGCCTTTTGT CGAATTCATG
CTGGCTGCCC TGCGTCAGGC ATTGCTTGAA GGTGTTTCAG GCGATCAAGT AAGCGATCAA
GTAAGCGATC AAGTAGCACG CCTGCTGCAA GCGTTACCGC CAGGTGAGGC CCTCAAAGCC
AGCGAATTGA TGCAGCGCTT AGGGCTGGCG CACCGTCCGA CCTTTAGCAA CAACTACCTC
AAGCCTGCCC TGGTTGCCGG CTTGATCGAG ATGACCGACC CCGCGTCGCC GCGCAGTCCG
GCACAGAAGT ACCGGCGAAC TGGGTTTTCC AAGTAA
 
Protein sequence
MRKYQPPLTL TPRMLALAAE IGERVGHLSA LHEGALTPQL RRGNRIRTIQ ASLAIENNTL 
SVEQVTAVLD GKRVLGLPRE IQEVRNAFSA YEVMPEWQPS LRDDLLAAHA LLMHGLIDDA
GSYRRGGVGI YRGERLLHMA PPANRVPQLM DDLLAWLSRC ELHPLIASCV FHYEFEFIHP
FADGNGRMGR LWQTLILSQW RAVLAYLPVE SVIREQQDAY YEALAVSDKA AEAAPFVEFM
LAALRQALLE GVSGDQVSDQ VSDQVARLLQ ALPPGEALKA SELMQRLGLA HRPTFSNNYL
KPALVAGLIE MTDPASPRSP AQKYRRTGFS K