Gene PA14_28680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28680 
SymbolrplT 
ID4380755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2469972 
End bp2470328 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID639324875 
Product50S ribosomal protein L20 
Protein accessionYP_790448 
Protein GI116050731 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000000531022 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGTG TTAAGCGTGG CGTTATCGCC CGTCGTCGTC ACAAGAAAAT TCTGAAGCTC 
GCCAAGGGCT ACTACGGTGC ACGCTCGCGC GTGTTCCGCG TTGCCAAGCA GGCGGTGATC
AAGGCTGGCC AATACGCCTA CCGTGACCGT CGTCAGCGCA AGCGTCAGTT CCGCGCACTG
TGGATCGCCC GTATCAACGC TGGTGCTCGT CAGAACGGTC TGTCCTACAG CCGCCTGATC
GCCGGCCTGA AAAAGGCGGC CATCGAGATC GACCGTAAGG TCCTGGCCGA TCTGGCAGTG
AACGAAAAAG CGGCGTTTAC CGCGATTGTC GAGAAAGCGA AGGCAAGCTT GGCTTAA
 
Protein sequence
MARVKRGVIA RRRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQRKRQFRAL 
WIARINAGAR QNGLSYSRLI AGLKKAAIEI DRKVLADLAV NEKAAFTAIV EKAKASLA