Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28090 |
Symbol | |
ID | 4380808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2431987 |
End bp | 2432544 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324821 |
Product | hypothetical protein |
Protein accession | YP_790395 |
Protein GI | 116050784 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00135533 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCG ACCGCCTGGC CGGCTACAGC CGCCTGATGG CTACCCTGAC CCTGCTGTTG ATCGCCGGCA TGCTGCTGCT CAACGCCGCG AGCTGGATCT TCCCCGACCT CGCCAGCGAG CACGGCCTCG GCTTCGCCCT CACTGCCACC GGCGTCGCCG GCGACCTCGG CGTTGCGGCG CGAGACATGC CGCTCTGGCA GGCCCTCGGC GGCATCCTCC TGTCGAGCCT GCCGCTGCTG GTCCTGGCCA GCGGACTGCA AGCGCTGCGG CGGCTGTTCC AGCACTACGG GCGCGGCGAG TATTTCTGCG AAGAAGCCGC GGCGCTGCTC GGCAAGGTCG GCCTGTGCCT GGCTTGCTGG GTGCTGGCGA ACTTCCTGCT GGAGCCGCTG CTGACGGTCT GGGTCACCTT CCTCCAACCC CAGGGGCAAC GCATCGTCAG TCTCAGCTTC GGTTCGGCGG AACTGGTCAG CCTGTTCGCC GCCGCCTCGG TGATGGTGAT CGCGCGCATC CAGCGCAAGG CCGCCCTGCT CGCCGAGGAA AACCGCCAGT TCGTCTGA
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Protein sequence | MTSDRLAGYS RLMATLTLLL IAGMLLLNAA SWIFPDLASE HGLGFALTAT GVAGDLGVAA RDMPLWQALG GILLSSLPLL VLASGLQALR RLFQHYGRGE YFCEEAAALL GKVGLCLACW VLANFLLEPL LTVWVTFLQP QGQRIVSLSF GSAELVSLFA AASVMVIARI QRKAALLAEE NRQFV
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