Gene PA14_27410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_27410 
Symbol 
ID4380885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2377734 
End bp2379173 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content70% 
IMG OID639324759 
Productputative outer membrane protein precursor 
Protein accessionYP_790336 
Protein GI116050841 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.721932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCA CTCCGCTCCT GCTTATTGCC AGCCTTGCGC TCGGCGCCTG CAGCCTCGGT 
CCCGACTTCA CCCGCCCGAA CCGCCCTGCG CCCGGCGACT GGTCGCTCCA GGCCGCTACC
GGCAACCCCA GCCACCTCGC CGCCGCGCCA CTCGCAGCAC AATGGTGGAC GCTGTTCGAC
GACGCGCAAT TGAACGCCCT GCTGCAACGG GTCCAGCGTG CCAACCTCGA CCTGCGCAGC
GCCGCGGCGC GCCTGCAGCA GAGCCGCGCG ATCCGTCGCA GCCTCGGCGG TGACGCCCTG
CCCTCGGTGG ACGCCAGCGG CAACTACCAG CGCCAGCGGA CCACCAGCGC CGGCCTGTTC
GATCCTTCCG GCAAGGCCGG CAAAGGCAAC TACAACCACG CCCTGGCCGG CTTCGACGCC
TCTTGGGAGC TGGACTTCTG GGGCCGCGTG CGACGCGAGC TGGAAGCCGC CGACGCGACG
GTGGAAGCCA GCGAGAACGA ACTGCGCGAC GTGCAGGTCT CGGTGCTGGC GGAAGCCGCG
CGCGACTATA TCCAGTTGCG CGGCGAACAG AGCCGTGCGG CGATCATCCG TGACAACCTC
GAGACCGCAC GGCACAGCCT GGAACTCACC CGCACGCGCC TGGCCAACGG CGTCGCCACC
GACCTCGAGG TAGCCCAGGC GCTGGCCCAG GTGGCCAGCA TGGAGGCACG CCTGCCCGAG
GTGGAAAAGA ACCAGGCGCA CCTGGTCAAC GCCCTTGGCT ACCTGGTCGG AGCCAGCCCC
GGCAGCCTGC TCGCCGAACT CGGCCCGGCG CGGGAGATTC CGCGTCCGCC GGGCAGCGTG
CCGGTCGGCC TGCCGTCCGA ACTGGCCCAG CGCCGCCCCG ACATCCGTCG TGCCGAAGCG
CGCCTGCACG CCGCTACCGC CAGCATCGGC GTGGCCAAGG CGGACTTCTA TCCGCGCATC
ACGCTCAACG GCAACTTCGG TTTCGAATCC CTGCAACTGT CCAGCCTGGG CGACTGGGAC
CATCGCCAGT TCGCCATCGG CCCGGCGTTC AGCCTGCCGA TCTTCGAAGG CGGACGCCTG
CGCGGACGCC TGGAGCTACG CGAGGCACAG CAGCAGGAAG CCGCCATCGA CTACCAGCGC
ACCGTGCTGC GTGCCTGGCA GGAAGTCGAC GACGCGATGC ACGACTACGC CGCCAACCAG
CGCCGCCAGG AGCGCCTCGG CGAAGCCGTG GCGCAGAACC GCCGCGCCCT GCAGAGCGCC
CGCGAGCAAT ACCGCGCCGG CGCGGTGGAC TTCCTCAGCG TGCTCGACAG CCAGCGGCAA
CTGCTGGACA ACCAGGAACA GCAGGTCGCC AGCGACGAAG CGGTGTCTCT GACCCTGGTC
AACCTCTACA AGGCGCTGGG CGGCGGCTGG AGCCCAACGT CCGACCCGGC GTCGGGCTGA
 
Protein sequence
MKGTPLLLIA SLALGACSLG PDFTRPNRPA PGDWSLQAAT GNPSHLAAAP LAAQWWTLFD 
DAQLNALLQR VQRANLDLRS AAARLQQSRA IRRSLGGDAL PSVDASGNYQ RQRTTSAGLF
DPSGKAGKGN YNHALAGFDA SWELDFWGRV RRELEAADAT VEASENELRD VQVSVLAEAA
RDYIQLRGEQ SRAAIIRDNL ETARHSLELT RTRLANGVAT DLEVAQALAQ VASMEARLPE
VEKNQAHLVN ALGYLVGASP GSLLAELGPA REIPRPPGSV PVGLPSELAQ RRPDIRRAEA
RLHAATASIG VAKADFYPRI TLNGNFGFES LQLSSLGDWD HRQFAIGPAF SLPIFEGGRL
RGRLELREAQ QQEAAIDYQR TVLRAWQEVD DAMHDYAANQ RRQERLGEAV AQNRRALQSA
REQYRAGAVD FLSVLDSQRQ LLDNQEQQVA SDEAVSLTLV NLYKALGGGW SPTSDPASG