| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_27410 |
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| Symbol | |
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| ID | 4380885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2377734 |
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| End bp | 2379173 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639324759 |
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| Product | putative outer membrane protein precursor |
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| Protein accession | YP_790336 |
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| Protein GI | 116050841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.721932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA CTCCGCTCCT GCTTATTGCC AGCCTTGCGC TCGGCGCCTG CAGCCTCGGT
CCCGACTTCA CCCGCCCGAA CCGCCCTGCG CCCGGCGACT GGTCGCTCCA GGCCGCTACC
GGCAACCCCA GCCACCTCGC CGCCGCGCCA CTCGCAGCAC AATGGTGGAC GCTGTTCGAC
GACGCGCAAT TGAACGCCCT GCTGCAACGG GTCCAGCGTG CCAACCTCGA CCTGCGCAGC
GCCGCGGCGC GCCTGCAGCA GAGCCGCGCG ATCCGTCGCA GCCTCGGCGG TGACGCCCTG
CCCTCGGTGG ACGCCAGCGG CAACTACCAG CGCCAGCGGA CCACCAGCGC CGGCCTGTTC
GATCCTTCCG GCAAGGCCGG CAAAGGCAAC TACAACCACG CCCTGGCCGG CTTCGACGCC
TCTTGGGAGC TGGACTTCTG GGGCCGCGTG CGACGCGAGC TGGAAGCCGC CGACGCGACG
GTGGAAGCCA GCGAGAACGA ACTGCGCGAC GTGCAGGTCT CGGTGCTGGC GGAAGCCGCG
CGCGACTATA TCCAGTTGCG CGGCGAACAG AGCCGTGCGG CGATCATCCG TGACAACCTC
GAGACCGCAC GGCACAGCCT GGAACTCACC CGCACGCGCC TGGCCAACGG CGTCGCCACC
GACCTCGAGG TAGCCCAGGC GCTGGCCCAG GTGGCCAGCA TGGAGGCACG CCTGCCCGAG
GTGGAAAAGA ACCAGGCGCA CCTGGTCAAC GCCCTTGGCT ACCTGGTCGG AGCCAGCCCC
GGCAGCCTGC TCGCCGAACT CGGCCCGGCG CGGGAGATTC CGCGTCCGCC GGGCAGCGTG
CCGGTCGGCC TGCCGTCCGA ACTGGCCCAG CGCCGCCCCG ACATCCGTCG TGCCGAAGCG
CGCCTGCACG CCGCTACCGC CAGCATCGGC GTGGCCAAGG CGGACTTCTA TCCGCGCATC
ACGCTCAACG GCAACTTCGG TTTCGAATCC CTGCAACTGT CCAGCCTGGG CGACTGGGAC
CATCGCCAGT TCGCCATCGG CCCGGCGTTC AGCCTGCCGA TCTTCGAAGG CGGACGCCTG
CGCGGACGCC TGGAGCTACG CGAGGCACAG CAGCAGGAAG CCGCCATCGA CTACCAGCGC
ACCGTGCTGC GTGCCTGGCA GGAAGTCGAC GACGCGATGC ACGACTACGC CGCCAACCAG
CGCCGCCAGG AGCGCCTCGG CGAAGCCGTG GCGCAGAACC GCCGCGCCCT GCAGAGCGCC
CGCGAGCAAT ACCGCGCCGG CGCGGTGGAC TTCCTCAGCG TGCTCGACAG CCAGCGGCAA
CTGCTGGACA ACCAGGAACA GCAGGTCGCC AGCGACGAAG CGGTGTCTCT GACCCTGGTC
AACCTCTACA AGGCGCTGGG CGGCGGCTGG AGCCCAACGT CCGACCCGGC GTCGGGCTGA
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| Protein sequence | MKGTPLLLIA SLALGACSLG PDFTRPNRPA PGDWSLQAAT GNPSHLAAAP LAAQWWTLFD
DAQLNALLQR VQRANLDLRS AAARLQQSRA IRRSLGGDAL PSVDASGNYQ RQRTTSAGLF
DPSGKAGKGN YNHALAGFDA SWELDFWGRV RRELEAADAT VEASENELRD VQVSVLAEAA
RDYIQLRGEQ SRAAIIRDNL ETARHSLELT RTRLANGVAT DLEVAQALAQ VASMEARLPE
VEKNQAHLVN ALGYLVGASP GSLLAELGPA REIPRPPGSV PVGLPSELAQ RRPDIRRAEA
RLHAATASIG VAKADFYPRI TLNGNFGFES LQLSSLGDWD HRQFAIGPAF SLPIFEGGRL
RGRLELREAQ QQEAAIDYQR TVLRAWQEVD DAMHDYAANQ RRQERLGEAV AQNRRALQSA
REQYRAGAVD FLSVLDSQRQ LLDNQEQQVA SDEAVSLTLV NLYKALGGGW SPTSDPASG
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