Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_26640 |
Symbol | |
ID | 4380940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2320164 |
End bp | 2321990 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324703 |
Product | long-chain-acyl-CoA synthetase |
Protein accession | YP_790281 |
Protein GI | 116050896 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACG CCGACCTGAT CACTTTCAAC CGTTTCGTTG CCCGCCTGCC TGCCACCTTC GGCCGCGTGC CGCGCATGCT GCGCGGCCTG TACTACACCG CGATCCGTAA CCGCGAGAAG AGCCTGTCCC TGGGCTGGGC GCTGGAGCGC GCGGCACGCC TGTACCCGGA CAACCCGGCG GTGCTCGACG GCCAGCGGCG GATCAGCTAC GCCCTGTTCA ACGGCTGGGC CAATCGCCTG GCGCGCGCCT TCAAGGCCGA GGGCGTAGGC CACGGCAGCG TGGTCGCGGT GATGCTGGAG AACCGCGTCG AGCTGCTGGC GATCCTCGCC GCCCTGGCCA AGCTCGGCGC CATCGGCGCA CTGGTCAACA CCACCCAGCG CGGCAAGGTC CTGGTGCACA GCCTGAACCT GGTGAAGCCC GGCCACTTCG TGGTCGGCGA AGAGTTGCGC GAGGTGTTCG AGGAAGTCCG CCAGGAGGTG CTCGGCAACG CCGGCCATTG CTACTGGGTC GACGACGGCG ACACCCTCGG CGATCCCGGC TCGCCGCCGA TGGGCTGGCG CAACCTGATG CGCCTGGCCC AGGGACAGAC CTCGGAGAAC CTCGAGGACA CCGGCAGGGT GCGGCTCAAG GACTCCTGCT TCTACATCTA CACCTCCGGC ACCACCGGCC TGCCGAAAGC CTCGATCATG AGCCACGGCA AGTGGATCAA GGCCTACGGC GGCTTCGGCC ATTCCGGCCT GGGCCTGGGC CGCGACGACG TGCTCTACCT GACCCTGCCC TGCTACCACA ACAACGCCGT GACCGTCTGC TGGAGCGCGG CGCTCGCCGG CGGCGCGGCC ATGGCCCTGC GCCGCAAGTT CTCCGCCAGC GGTTTCTGGA AGGACGTGCA GCACTACCGG GCGACCTGCT TCGGCTACAT CGGCGAACTC TGCCGCTACC TGCTGAACCA GCCGCCGTGC GCCGAGGAAC GCGGCAATAG CCTGACCTGC ATGATCGGCA ACGGCCTGCG CCCGTCGATC TGGGCCGAGT TCAAGCAACG CTTCGAGATC CAGCGGATCA CCGAGTTCTA CGCTTCCAGC GAAGGCAACA TCGGCTTCAC CAACGTATTC AATTTCGACA ATACGGTGGG CTTCTCCCCA GCCACCTACG CCATCGTCCG CTACGACCTG GAGAACGACC GCCCGGTGCG CGACGCCAAG GGCTTCATGG AGAAGGTCGG CAAGGGCGAG GTCGGCCTGC TGATCAGCGA GATCAGCGCG AAGTGGCCGT TCGACGGCTA CACCGATCCG GCCAAGAGCG AAGCGGTGAT CCTCCGCGAC GTGTTCAAGA AGGGCGACGC CTGGTTCAAC ACCGGCGACC TGATGCGCGA CATCGGTTTC AAGCACACCC AGTTCGTCGA CCGTCTCGGC GACACCTTCC GCTGGAAGGG CGAGAACGTT TCCACCACCG AGGTGGAAAA CGCTCTCGGC GCCTTCGACG GGGTCGAAGA TGCGGTGGTC TACGGCGTGG AGATTCCCGG CACCAACGGC CGCTGCGGGA TGGCCGCACT GCGCCTGGCC GATGGCGTCG AACTGGACCG CGACGCCCTC GCCGCGCACC TCGACCGCGA GTTGCCGGCC TATGCCACGC CGGTGTTCCT GCGCCTGCTG CGCGAAGTCG AGACCACCGG CACCTTCAAG TACAAGAAGA CCGACCTCAA GCGCGACGCC TACGATCCCG CGCGGGTGAG CGACAAACTC TTCGTCAGGT TGCCCGGCAG CGCCGGCTAC CAGCCGCTGG ACGCGGAGCT GTACCAGGCG TTGCAGGAGC AGCGCTACCG CTTCTGA
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Protein sequence | MTHADLITFN RFVARLPATF GRVPRMLRGL YYTAIRNREK SLSLGWALER AARLYPDNPA VLDGQRRISY ALFNGWANRL ARAFKAEGVG HGSVVAVMLE NRVELLAILA ALAKLGAIGA LVNTTQRGKV LVHSLNLVKP GHFVVGEELR EVFEEVRQEV LGNAGHCYWV DDGDTLGDPG SPPMGWRNLM RLAQGQTSEN LEDTGRVRLK DSCFYIYTSG TTGLPKASIM SHGKWIKAYG GFGHSGLGLG RDDVLYLTLP CYHNNAVTVC WSAALAGGAA MALRRKFSAS GFWKDVQHYR ATCFGYIGEL CRYLLNQPPC AEERGNSLTC MIGNGLRPSI WAEFKQRFEI QRITEFYASS EGNIGFTNVF NFDNTVGFSP ATYAIVRYDL ENDRPVRDAK GFMEKVGKGE VGLLISEISA KWPFDGYTDP AKSEAVILRD VFKKGDAWFN TGDLMRDIGF KHTQFVDRLG DTFRWKGENV STTEVENALG AFDGVEDAVV YGVEIPGTNG RCGMAALRLA DGVELDRDAL AAHLDRELPA YATPVFLRLL REVETTGTFK YKKTDLKRDA YDPARVSDKL FVRLPGSAGY QPLDAELYQA LQEQRYRF
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