Gene PA14_26640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_26640 
Symbol 
ID4380940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2320164 
End bp2321990 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content67% 
IMG OID639324703 
Productlong-chain-acyl-CoA synthetase 
Protein accessionYP_790281 
Protein GI116050896 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG CCGACCTGAT CACTTTCAAC CGTTTCGTTG CCCGCCTGCC TGCCACCTTC 
GGCCGCGTGC CGCGCATGCT GCGCGGCCTG TACTACACCG CGATCCGTAA CCGCGAGAAG
AGCCTGTCCC TGGGCTGGGC GCTGGAGCGC GCGGCACGCC TGTACCCGGA CAACCCGGCG
GTGCTCGACG GCCAGCGGCG GATCAGCTAC GCCCTGTTCA ACGGCTGGGC CAATCGCCTG
GCGCGCGCCT TCAAGGCCGA GGGCGTAGGC CACGGCAGCG TGGTCGCGGT GATGCTGGAG
AACCGCGTCG AGCTGCTGGC GATCCTCGCC GCCCTGGCCA AGCTCGGCGC CATCGGCGCA
CTGGTCAACA CCACCCAGCG CGGCAAGGTC CTGGTGCACA GCCTGAACCT GGTGAAGCCC
GGCCACTTCG TGGTCGGCGA AGAGTTGCGC GAGGTGTTCG AGGAAGTCCG CCAGGAGGTG
CTCGGCAACG CCGGCCATTG CTACTGGGTC GACGACGGCG ACACCCTCGG CGATCCCGGC
TCGCCGCCGA TGGGCTGGCG CAACCTGATG CGCCTGGCCC AGGGACAGAC CTCGGAGAAC
CTCGAGGACA CCGGCAGGGT GCGGCTCAAG GACTCCTGCT TCTACATCTA CACCTCCGGC
ACCACCGGCC TGCCGAAAGC CTCGATCATG AGCCACGGCA AGTGGATCAA GGCCTACGGC
GGCTTCGGCC ATTCCGGCCT GGGCCTGGGC CGCGACGACG TGCTCTACCT GACCCTGCCC
TGCTACCACA ACAACGCCGT GACCGTCTGC TGGAGCGCGG CGCTCGCCGG CGGCGCGGCC
ATGGCCCTGC GCCGCAAGTT CTCCGCCAGC GGTTTCTGGA AGGACGTGCA GCACTACCGG
GCGACCTGCT TCGGCTACAT CGGCGAACTC TGCCGCTACC TGCTGAACCA GCCGCCGTGC
GCCGAGGAAC GCGGCAATAG CCTGACCTGC ATGATCGGCA ACGGCCTGCG CCCGTCGATC
TGGGCCGAGT TCAAGCAACG CTTCGAGATC CAGCGGATCA CCGAGTTCTA CGCTTCCAGC
GAAGGCAACA TCGGCTTCAC CAACGTATTC AATTTCGACA ATACGGTGGG CTTCTCCCCA
GCCACCTACG CCATCGTCCG CTACGACCTG GAGAACGACC GCCCGGTGCG CGACGCCAAG
GGCTTCATGG AGAAGGTCGG CAAGGGCGAG GTCGGCCTGC TGATCAGCGA GATCAGCGCG
AAGTGGCCGT TCGACGGCTA CACCGATCCG GCCAAGAGCG AAGCGGTGAT CCTCCGCGAC
GTGTTCAAGA AGGGCGACGC CTGGTTCAAC ACCGGCGACC TGATGCGCGA CATCGGTTTC
AAGCACACCC AGTTCGTCGA CCGTCTCGGC GACACCTTCC GCTGGAAGGG CGAGAACGTT
TCCACCACCG AGGTGGAAAA CGCTCTCGGC GCCTTCGACG GGGTCGAAGA TGCGGTGGTC
TACGGCGTGG AGATTCCCGG CACCAACGGC CGCTGCGGGA TGGCCGCACT GCGCCTGGCC
GATGGCGTCG AACTGGACCG CGACGCCCTC GCCGCGCACC TCGACCGCGA GTTGCCGGCC
TATGCCACGC CGGTGTTCCT GCGCCTGCTG CGCGAAGTCG AGACCACCGG CACCTTCAAG
TACAAGAAGA CCGACCTCAA GCGCGACGCC TACGATCCCG CGCGGGTGAG CGACAAACTC
TTCGTCAGGT TGCCCGGCAG CGCCGGCTAC CAGCCGCTGG ACGCGGAGCT GTACCAGGCG
TTGCAGGAGC AGCGCTACCG CTTCTGA
 
Protein sequence
MTHADLITFN RFVARLPATF GRVPRMLRGL YYTAIRNREK SLSLGWALER AARLYPDNPA 
VLDGQRRISY ALFNGWANRL ARAFKAEGVG HGSVVAVMLE NRVELLAILA ALAKLGAIGA
LVNTTQRGKV LVHSLNLVKP GHFVVGEELR EVFEEVRQEV LGNAGHCYWV DDGDTLGDPG
SPPMGWRNLM RLAQGQTSEN LEDTGRVRLK DSCFYIYTSG TTGLPKASIM SHGKWIKAYG
GFGHSGLGLG RDDVLYLTLP CYHNNAVTVC WSAALAGGAA MALRRKFSAS GFWKDVQHYR
ATCFGYIGEL CRYLLNQPPC AEERGNSLTC MIGNGLRPSI WAEFKQRFEI QRITEFYASS
EGNIGFTNVF NFDNTVGFSP ATYAIVRYDL ENDRPVRDAK GFMEKVGKGE VGLLISEISA
KWPFDGYTDP AKSEAVILRD VFKKGDAWFN TGDLMRDIGF KHTQFVDRLG DTFRWKGENV
STTEVENALG AFDGVEDAVV YGVEIPGTNG RCGMAALRLA DGVELDRDAL AAHLDRELPA
YATPVFLRLL REVETTGTFK YKKTDLKRDA YDPARVSDKL FVRLPGSAGY QPLDAELYQA
LQEQRYRF