Gene PA14_25940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25940 
Symbol 
ID4380992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2262349 
End bp2263443 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content72% 
IMG OID639324649 
Producthypothetical protein 
Protein accessionYP_790227 
Protein GI116050948 
COG category[S] Function unknown 
COG ID[COG5446] Predicted integral membrane protein 
TIGRFAM ID[TIGR02458] cobalt transporter subunit CbtA (proposed) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00053463 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0606013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCT CCGAGCCAGT CCGGCGCTGC CCCCGCAACG GTAAGCGCAT CGCGCGCGAG 
CCCGGAGACC GGCCTGGAAC CTTTCGTTTG ATTCACCCGC GGTGGGCGGG CGCAAGCGTG
AAGCGGGCCG TCCGGTCCCG TTCCTCGTGC GTACTCCTCT GCCACGCCCA TGCCAATCCA
GAGGGAACGC ACCATGTCCA GCAGCACCCT GGCGCACGCC AGCTCCACCA CCTCCCTGTC
GAAGCGACTG AGCCTGGCCA TCGGCGCCGG CCTGCTCGGC GCGCTGCTGG TCTATTTCGC
CGGTTTCTCG CACATCGACG CGGTACACAA CGCCGCCCAC GATACCCGGC ACAGCTCCGG
CTTCCCCTGC CACTGAGTCG CGAGAGAACC AGAATGATCA AGCGCATCGC CCAGACCGCC
GGCTTCGCCG GCCTGCTCGC CGCCCTGCTG CTGACCCTGC TGCAGATTCT CTGGGTCACC
CCGCTGATCC TCGAGGCGGA GACCTACGAG AAGAGCGAGC CGGTCGCGAC CCAGCCCCAC
GAACACGCCC CCGGCGTCGC CGCCCATGTC CACGACGAGG AGGCCTGGGA GCCGGAGGAC
GGCTGGCAGC GTACCCTCTC CACCACCGGC GGCAACCTGG TGGTGGCGGT CGGCTTCGCC
CTGATGCTCG CCGGCCTCTT CACCCTGCGC GCGCCGGGCC AGACCTGGCA GGGCCTGCTC
TGGGGCCTGG CCGGCTACGC GGTGTTCTGC CTTGCGCCGT CGCTGGGCCT GCCGCCGGAG
CTGCCGGGTA CCGCCGCGGC CGACCTGGTG CAACGCCAGT ACTGGTGGAT CGCCACCGCC
GCCGCCACCG CGGTGGGCCT GGCCCTGCTG GTGTTCGGCG GCAACTGGCC GCTGAAGCTG
GTCGGCGCCG TCCTGCTGGC GCTGCCGCAC CTGTTCGGCG CGCCGCAGCC CGAGGTCCAT
GCCAGCCTGG CGCCGGAAGC CCTGGCCCAG CGTTTCGTGA TCGCCTCGCT GGTCAGCAAT
GCGCTGTTCT GGGCCGCCCT CGGCCTGGCC GCTGCCTGGC TGTTCCGGCG CAACCGGGGC
GGCGTCGACG CCTGA
 
Protein sequence
MTLSEPVRRC PRNGKRIARE PGDRPGTFRL IHPRWAGASV KRAVRSRSSC VLLCHAHANP 
EGTHHVQQHP GARQLHHLPV EATEPGHRRR PARRAAGLFR RFLAHRRGTQ RRPRYPAQLR
LPLPLSRERT RMIKRIAQTA GFAGLLAALL LTLLQILWVT PLILEAETYE KSEPVATQPH
EHAPGVAAHV HDEEAWEPED GWQRTLSTTG GNLVVAVGFA LMLAGLFTLR APGQTWQGLL
WGLAGYAVFC LAPSLGLPPE LPGTAAADLV QRQYWWIATA AATAVGLALL VFGGNWPLKL
VGAVLLALPH LFGAPQPEVH ASLAPEALAQ RFVIASLVSN ALFWAALGLA AAWLFRRNRG
GVDA