Gene PA14_25790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25790 
Symbol 
ID4384339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2250687 
End bp2251820 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID639324637 
Producthypothetical protein 
Protein accessionYP_790215 
Protein GI116050960 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.226944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGTT ACCAGGACGA ATTCGACCAG ACCAACGGTC TGCGCTACCT CAACCACGCA 
GCGGTCGCAC CCTGGCCTAG ACGCGCCGCC GACGCGGTGA GCGCCTTCGC CCGGGAGAAC
GTCGCCCACG GCGCCAGCGA CTATCCGGAA TGGCTGAAGA TAGAACATCG CCTGCGCGAA
CGCCTTGCCC GACTGCTCAA TGCGCGCGCC GGCAGCGACC TCGCACTGGT CAAGAACACC
TCCGAGGCGC TTTCCTTCGT AGCCTTCGGC CTGGATTGGC GAGAGGGCGA CCAGGTCGTC
ATCGGCAACG AGGAGTTCCC CTCCAATAGA GTGGTCTGGG AAGCCTTGCG CCCGCGCGGC
GTCGAAGTGG TCGAGGTCGG TCTCGCCGGC GACGACCCCG AGGGCGCCCT GCTCGCCGCC
TGCGGCCCAC GCACCCGCCT GCTGTCGATC AGCGCGGTGC AGTACGCCAG CGGCCTGCGC
CTTGACCTGG AGCGCATCGG CACGGGATGT CGCCGCCGCG GCGTGCTGTT CTGCATCGAC
GCGATCCAGC AGCTCGGCGC CCTGCCCTTC GACGTACAGG CCTACGATTG TGCCTTCGCC
ATGGCCGATG GGCACAAGTG GATGCTCGGC CCCGAAGGGC TGGGCGTCTT CTATTGCCAT
CCCGAGCAGC GCGAGCGCCT GGCGCTGCAC GAATATGGCT GGCACATGCT GGAACATGCC
CTCGATTACG AGCGTCGCGA CTGGCGGCCG GCGCGCAGCG CCCGGCGCTT CGAATGCGGC
AGCCCGAACA TGCTCGGCGC GATGGCCCTG GAGGCCAGCC TGGGGCTGTT GGAGGAGGTC
GGCATGGAGC GGGTCGGCAG AGACATCGCC GAGCGCGTCC AGTGGCTACA GGACGGTCTG
TCGGGAATTC CCGGGGTACG CCTGCACAGC CCGCGGAACC CGAGCCGACG CGCGGGCATC
CTGACCTTCA GCCTGGACGG CCAGGACAGC CGGACACTCT TCGAAACGCT TCGCCAGGAG
CGGGTCATTT GCGCCCAGCG TGGCGGAGGT ATCCGTTTTT CCCCGCACTT CTACACGAGT
TCGACGGTGA TCGACGACAC CCTGGCGATC TTGCGCCAGG TCGCAGGCAC CTAG
 
Protein sequence
MNCYQDEFDQ TNGLRYLNHA AVAPWPRRAA DAVSAFAREN VAHGASDYPE WLKIEHRLRE 
RLARLLNARA GSDLALVKNT SEALSFVAFG LDWREGDQVV IGNEEFPSNR VVWEALRPRG
VEVVEVGLAG DDPEGALLAA CGPRTRLLSI SAVQYASGLR LDLERIGTGC RRRGVLFCID
AIQQLGALPF DVQAYDCAFA MADGHKWMLG PEGLGVFYCH PEQRERLALH EYGWHMLEHA
LDYERRDWRP ARSARRFECG SPNMLGAMAL EASLGLLEEV GMERVGRDIA ERVQWLQDGL
SGIPGVRLHS PRNPSRRAGI LTFSLDGQDS RTLFETLRQE RVICAQRGGG IRFSPHFYTS
STVIDDTLAI LRQVAGT