Gene PA14_25730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25730 
Symbol 
ID4384344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2246591 
End bp2247640 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID639324632 
Producthypothetical protein 
Protein accessionYP_790210 
Protein GI116050965 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0867332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC TGCTGGTGCT GCTGGAGAGT GGCCTGTTGT TCGTTGGCCT CTGCGTCGGC 
CTGGCTGCAT GGCAGCAGCA GCGGGCGCTG GAGCAGCCCC TGCAATTGAC CGAGGAGCGC
CTGCTGGACG TTTCCTCGGG CTCCACGCCG GGCGGCATGC TCGCGCGTCT GGAGCAGGAA
GAGGTGCTCC ATGGCGCGTT CTGGCTGCGC CTCTACTGGC GTTTCAACCT GCCGGGCCAG
GCCCTGCACA GCGGTGAATA CCGCCTCTTG CCGGGGATGA CGGGCGCCGA CCTGCTGGAA
CTCTGGCGTG AAGGCGAGGT GGTGCAGTAC AGCCTGACCC TGGTCGAGGG CTGGAGTTTC
CGCCAGGTGC GCGAAGCGCT CGCCAGGCAG GGCAAGCTGG AGCAGACCCT GGCCGGCCTG
AGCGACGGCG AGATCATGCA ACGCCTCGGC AAGCCCGACG AAGTGGCCGA AGGGCGCTTC
TTCCCCGATA CCTACCGCTA CACCCGTGGC ATGCGCGACA TCGACATACT GCGCAAGGCC
TACCAGCGGA TGCAGAACAT CCTCGCCAAG GAATGGGATG GCCGCAGCCA GGACCTGCCT
TATCGCGACG CCTACCAGGC GCTGATCATG GCCTCGTTGG TGGAAAAGGA AACCGGCGTG
CCGGAAGAGC GTTCGCAGAT CGCCGGCGTC TTCGTCCGCC GCCTGCAGCG CGGCATGCTG
TTGCAGACCG ATCCGACGGT GATCTATGGC ATGGGCGAGC GCTACAACGG CAAGATCACC
CGCGCCGACC TGCGCGAACC GACCCCTTAC AATACCTATG TGGTGCCGGG CATGCCGCCG
ACCCCGATCG CCCTGGCCGG GCGCGAGGCT ATTCGCGCCG CGCTGCATCC GGCCGAGGGC
GAGACCCTGT ATTTCGTGGC GCGCGGCGAT GGCAGCCACG TGTTCTCCAG CAGCCTGGAC
GAACACAACA AGGCGGTCCG CGAGTATCAG TTGAAGCGTC GCTCGGACTA TCGCTCCAGC
CCCGCGCCCA TCACCCCGCC GCCACAATGA
 
Protein sequence
MRKLLVLLES GLLFVGLCVG LAAWQQQRAL EQPLQLTEER LLDVSSGSTP GGMLARLEQE 
EVLHGAFWLR LYWRFNLPGQ ALHSGEYRLL PGMTGADLLE LWREGEVVQY SLTLVEGWSF
RQVREALARQ GKLEQTLAGL SDGEIMQRLG KPDEVAEGRF FPDTYRYTRG MRDIDILRKA
YQRMQNILAK EWDGRSQDLP YRDAYQALIM ASLVEKETGV PEERSQIAGV FVRRLQRGML
LQTDPTVIYG MGERYNGKIT RADLREPTPY NTYVVPGMPP TPIALAGREA IRAALHPAEG
ETLYFVARGD GSHVFSSSLD EHNKAVREYQ LKRRSDYRSS PAPITPPPQ