Gene PA14_25440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25440 
Symbol 
ID4381013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2223532 
End bp2224215 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID639324608 
Productputative lipoprotein releasing system, ATP-binding protein 
Protein accessionYP_790186 
Protein GI116050989 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR02211] lipoprotein releasing system, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA AGTCGGTGCT GAGTTGCCGC AACCTGAGCA AGAGCTACGA CGAGGGGCCG 
CAATCGGTGC AGGTGCTGTC CGGTGTCGAG TTGAACCTGC TGCCTGGGGA GCGGGTGGCT
ATCGTCGGCA GCTCCGGTTC GGGCAAGAGC ACCTTGCTGA ACATGCTCGG CGGCCTGGAC
ACGCCCTCCG CCGGCAGCGT CTGGCTCGCC GGCGAGGAAC TCTCGGCGCT GAACGAGACG
GCCCGCGGGC TGCTGCGCAA CCGCGCGCTG GGCTTCGTCT ACCAGTTCCA CCACCTGTTG
CCGGAGTTCA CCGCCCTGGA GAACGTCTGC ATGCCGCTGT TGATCGGCCG CACGCCGATC
ACCGAAGCCC GCCAGCGGGC GGCCGAGCTG CTGGAGCGGG TCGGGCTGGG GCATCGCCTG
TCGCACAAGC CGGCCGAGCT GTCCGGCGGC GAGCGCCAGC GGGTGGCGAT CGCCCGCGCG
CTGGTCAACC GTCCGCAGCT GGTACTGCTC GACGAGCCCA CCGGCAACCT CGACCAGCAT
ACCGCCCAGG GTATCCAGGA GCTGATGCTG GAACTGAGCC GTTCGTTGCA GACCTCGTTC
CTGGTGGTAA CCCACGATCT CCAGCTGGCC GGGCACATGG ATCGCATCCT GCGCCTGGAA
GAAGGCCGAC TGATCGCCGC GTAG
 
Protein sequence
MNDKSVLSCR NLSKSYDEGP QSVQVLSGVE LNLLPGERVA IVGSSGSGKS TLLNMLGGLD 
TPSAGSVWLA GEELSALNET ARGLLRNRAL GFVYQFHHLL PEFTALENVC MPLLIGRTPI
TEARQRAAEL LERVGLGHRL SHKPAELSGG ERQRVAIARA LVNRPQLVLL DEPTGNLDQH
TAQGIQELML ELSRSLQTSF LVVTHDLQLA GHMDRILRLE EGRLIAA