| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_25430 |
|---|
| Symbol | |
|---|
| ID | 4381015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2222289 |
|---|
| End bp | 2223539 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639324607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790185 |
|---|
| Protein GI | 116050991 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGAC CCCTGTCCGT TTTCATCGGC ACGCGCTATA CGCGGGCCAA ACGTCGCAGC
CATTTCGTCT CCTTCATTTC GCTGACCTCG ATGATCGGCC TGGCACTGGG CGTGCTGGTG
ATGATCGTGG TGCTCTCGGT GATGAACGGC TTCGATCGCG AAATGCGTAC CCGCATCCTC
GGCATGGTGC CGCAGGCCAC CGTCGAGTCG TACCAGCCCA TCGATGACTG GCGCGCCCTG
GCCGAGAAGG TCAAGGCCCA CGAGCATGTC ACCGCGGTAG CGCCGTTCAC CCAGATGCAG
GGCATGCTCA GCGCCAATGG CGCGGTGCAG ACGGTGATGG TCGATGCGGT CGATCCGCTG
GAAGAGGCCA AGGTCTCGAT CATTCCCGAT TTCTTCAAGC AGGGCTCGCT GGCGGAACTC
AAGGCCGGCG GCTTCGGCAT CGTCATCGGC CAACTGGCGG CGCAGAAGCT TGGCGTCGGC
ATTGGCGACA AGGTCACCCT GATCCTCCCC GAGGTGGCGG TCACCCCGGC CGGGGTATTC
CCGCGGATGA AGCGTTTCAC CGTGGTCGGC ACCTTCCGCG TCGGCGCCGG CGAACTGGAT
GGCGGCCTGT CGCTGATCCA CCTGGAAGAC GCCGCGCGCC TGCAGCGCTG GAAGACCAAC
CAGGTACAGG GGCTGCGCCT GAAGCTCGAC GACCTGTTCC AGGCGCCGCG GGTGGCCTGG
GAGATCGCCC GGACCCTGAC CGACAATGAC TTCTACGCCC GCGACTGGAC GCGCAGCCAC
GGCAACCTGT ACCAGGCCAT CCGCATGGAA AAGACCATGA TCGGCCTGTT GCTGCTGCTG
ATCGTCGCGG TCGCCGCGTT CAACATCATT TCCACCCTGG TGATGGTGGT CACCGACAAG
AAGTCGGACA TCGCCATCCT TCGTACCCTC GGCGCCACGC CGGGGCAGAT CATGGCTACC
TTCATGGTCC AGGGTACGGT GATCGGGGTG ATCGGCACGC TGGTCGGCGG GGTCCTCGGG
GTGGTCGCGG CACTCAACGT CAGCGCCTGG ATTTCCGCCC TGGAAAAGCT GCTGGGCCAC
CAGTTCCTCG CGTCCGACGT GTACTTCATC GATTACCTGC CGTCGCAACT GATGCTCGAC
GATGTCGTGC TGGTCTGCGG CGCGGCCCTG GTCCTCAGCT TCTTCGCCAC TTTGTATCCA
GCCTGGCGTG CGGCTCGCAC CCAGCCTGCG GAGGCTTTGC GTTATGAATG A
|
|---|
| Protein sequence | MFRPLSVFIG TRYTRAKRRS HFVSFISLTS MIGLALGVLV MIVVLSVMNG FDREMRTRIL
GMVPQATVES YQPIDDWRAL AEKVKAHEHV TAVAPFTQMQ GMLSANGAVQ TVMVDAVDPL
EEAKVSIIPD FFKQGSLAEL KAGGFGIVIG QLAAQKLGVG IGDKVTLILP EVAVTPAGVF
PRMKRFTVVG TFRVGAGELD GGLSLIHLED AARLQRWKTN QVQGLRLKLD DLFQAPRVAW
EIARTLTDND FYARDWTRSH GNLYQAIRME KTMIGLLLLL IVAVAAFNII STLVMVVTDK
KSDIAILRTL GATPGQIMAT FMVQGTVIGV IGTLVGGVLG VVAALNVSAW ISALEKLLGH
QFLASDVYFI DYLPSQLMLD DVVLVCGAAL VLSFFATLYP AWRAARTQPA EALRYE
|
|---|
| |