Gene PA14_25400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25400 
Symbol 
ID4381017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2220550 
End bp2221272 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID639324604 
Productputative phosphodiesterase 
Protein accessionYP_790182 
Protein GI116050993 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCTCA TCTATGGACA TCGCGGCGCC AAGGGCGAAG CGCCGGAAAA CACCCTGGCC 
AGCTTCCAGC GCTGCCTGGA GCATGGCGTC AACCGTTGCG AACTGGACCT GCACCTGTCC
CGCGACGGCG AACTGATGGT GATCCACGAC CCGACCCTGA AGCGCACCAC CGGCCGCCGC
GGCAAGGTCG CCGAACACGA CGCGGCCACC CTGGTCACCT ACGACGCGCG CGAAGGCGGC
CCCGGCTGGG TACGGCCGAC GCCGATCCCG CGGCTGGAGG AGTTGTTCGA GAAGTGCCCG
TTCGAGCACT GGCAACTGGA AGTGAAGAGC GCCTCGCGCG AACGCGCGGC GCGGACGGTA
ACGCGGATCA GGGAGCTGAC CGAGCGCTTC GGCAACCGCG ACAAGGTCAC CGTCACCAGC
GGTTCGCGGA CCGTGCTCAA GGCCCTCAAC GAACTGACCC CGGAGCTGTC GCGCGGGCTG
GTCGCCGAAT ACGCCTGGCT CGACCCGCTG AAGGTCGCCC AGCACTATGG CTGTGCCCTG
CTCGCCCTGA ACTGGACCCT ATGCACCCCG GAACGCCTGC TCAAGGCCCA GCGCCAGGGG
CTTCACGTCT CGGTGTGGAC GGTCAACGAA CCGGCGCTGA TGCGCCGGCT CGCCGACTTC
GGCGTGGACA GCCTGATCAC AGACTTTCCC GGTTTGGCCA GCGCCACCCT CGGGAATCGC
TGA
 
Protein sequence
MTLIYGHRGA KGEAPENTLA SFQRCLEHGV NRCELDLHLS RDGELMVIHD PTLKRTTGRR 
GKVAEHDAAT LVTYDAREGG PGWVRPTPIP RLEELFEKCP FEHWQLEVKS ASRERAARTV
TRIRELTERF GNRDKVTVTS GSRTVLKALN ELTPELSRGL VAEYAWLDPL KVAQHYGCAL
LALNWTLCTP ERLLKAQRQG LHVSVWTVNE PALMRRLADF GVDSLITDFP GLASATLGNR