Gene PA14_25390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25390 
Symbolsth 
ID4381018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2219113 
End bp2220507 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content63% 
IMG OID639324603 
Productsoluble pyridine nucleotide transhydrogenase 
Protein accessionYP_790181 
Protein GI116050994 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCT ACAACTACGA CGTGGTGATT TTGGGCACGG GTCCGGCGGG CGAAGGGGCG 
GCGATGAACG CCTCCAAGTA CGGACGCAAG CTGGCGGTAG TCGACAGTCG TCGCGTGGTC
GGAGGCAACT GCACGCACCT CGGCACCATT CCTTCCAAGG CCCTGCGCCA CTCGGTGAAG
CAGATCATCG AGTTCAACAC CAACCCGATG TTCCGCCAGA TCGGCGAGCC GCGCTGGTTC
TCCTTCCCCG ACGTGCTGAA GAGCGCCGAC CGGGTGATCT CCAAGCAGGT CGCCTCGCGT
ACCGGCTACT ACGCGCGCAA TCGCATCGAC ATGTTCACTG GCACCGCCAG CTTCGTCGAC
GAACGCACCG TCGAAGTGGT GACGCCGAGC GGCGCGGTGG AGCGCCTGGT CGCCGACCAG
TTCGTGATCG CCACCGGCTC GCGCCCGTAT CGTCCTTCGG ACATCAATTT CAACCACCCG
CGGGTCTACG ACAGCGACAC CATCCTGTCC CTGAGCCACA CCCCGCGCCG GCTGATCATC
TACGGAGCCG GGGTGATCGG CTGCGAATAC GCGTCGATCT TCAGCGGCCT GGGCGTGCTG
GTGGACCTGA TCGATACGCG CGACCAGTTG CTCAGCTTCC TCGATGACGA GATTTCCGAT
GCGCTGAGCT ACCACCTGCG CAACAACAAC GTGCTGATCC GCCACAACGA GGAGTACGAG
CGCGTCGAGG GGCTGGATAA CGGCGTCATC CTGCACCTGA AGTCGGGCAA GAAGATCAAG
GCGGACGCGC TGCTCTGGTG CAACGGCCGG ACCGGCAATA CCGACAAGCT CGGCCTGGAG
AACGTCGGCA TCAAGGTCAA CAGCCGTGGC CAGATCGAGG TGGACGAGAA CTACCGCACT
TCGGTGAGCA ACATCTTCGC CGCCGGCGAC GTGATCGGCT GGCCGAGCCT GGCCAGCGCT
GCCTACGACC AGGGCCGCTC GGCCGCCGGC AACATCGTCG AGAGCGACAG CTGGCGCTTC
GTCAACGATG TGCCGACCGG CATCTACACC ATTCCGGAGA TCAGCTCGAT CGGCAAGAAC
GAAAGCGAAC TGACCGCGGC GAAGATTCCC TACGAAGTGG GCAAGGCGTT CTTCAAGGGC
ATGGCCCGGG CGCAGATTTC CAACGAGCCG GTGGGCATGC TGAAGATCCT GTTCCATCGC
GAGACTCTGG AGATCCTCGG CGTGCACTGC TTCGGCGACC AGGCTTCGGA AATCGTCCAC
ATCGGCCAGG CGATCATGAA CCAGCCGGGC GAGCTGAATA CCCTGAAGTA CTTCGTCAAC
ACCACCTTCA ACTACCCGAC CATGGCGGAA GCCTATCGGG TAGCGGCGTT CGACGGCCTC
AACCGGCTTT TTTGA
 
Protein sequence
MAVYNYDVVI LGTGPAGEGA AMNASKYGRK LAVVDSRRVV GGNCTHLGTI PSKALRHSVK 
QIIEFNTNPM FRQIGEPRWF SFPDVLKSAD RVISKQVASR TGYYARNRID MFTGTASFVD
ERTVEVVTPS GAVERLVADQ FVIATGSRPY RPSDINFNHP RVYDSDTILS LSHTPRRLII
YGAGVIGCEY ASIFSGLGVL VDLIDTRDQL LSFLDDEISD ALSYHLRNNN VLIRHNEEYE
RVEGLDNGVI LHLKSGKKIK ADALLWCNGR TGNTDKLGLE NVGIKVNSRG QIEVDENYRT
SVSNIFAAGD VIGWPSLASA AYDQGRSAAG NIVESDSWRF VNDVPTGIYT IPEISSIGKN
ESELTAAKIP YEVGKAFFKG MARAQISNEP VGMLKILFHR ETLEILGVHC FGDQASEIVH
IGQAIMNQPG ELNTLKYFVN TTFNYPTMAE AYRVAAFDGL NRLF