Gene PA14_25360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25360 
Symbol 
ID4381020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2217682 
End bp2218710 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID639324601 
Productputative thiamine biosynthesis lipoprotein 
Protein accessionYP_790179 
Protein GI116050996 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGC CTTTCCGTCC GCTTGCCAAG GCCGGACTGG CAGCGCTGGC GCTGGTCCTG 
GCCGGTTGCG GCGACACCCT GGAAAGCTTC GGCGGCCCGA CCATGGGCAG CACCTATTCG
ATCAAGTACG TGCGCGGCGC CTCGGCGCCC GACGTCCAGA CGGCGAAAGC CGCGGTGGAA
GCGATCCTCG CCGAGGTCGA CCGGCAGATG TCCACCTACC GCGACGACTC CCTGGTCTCG
CGTTTCAATG CGCTGCCGGC GCAGTCCTGC ATGGAGCTGC CGCCACCGAT GCTGGAGTTG
CTGCGCTACG GCGGCGAGTT GTCGGAACAG AGCCAGGGCG CCTTCGACAT GACCGTCGAG
CCGCTGATGA ACCTCTGGGG CTTCGGTCCG CAGGCGCGGG TGGAGAAGGT TCCCAGCGCC
GAGCAGATCG CCGCGGCGCG CCGTGACGTC GGCCATCGAC ACCTGCGCAT CGACGGCCAG
CGCCTGTGCA AGGACGCCGC CGTACAGCTG GACTTCGACA GCATCGCCGC TGGCTATACG
GTGGACGCGG TAGGCGAACG CCTGAAGGAG CTTGGCGTGC GCAGCTACCT GGCGGAAATC
ACCGGCGAGT TGAAAGCCGA AGGGCGCAAG CCGGACGGCA CGCCCTGGCG CATCGCTATC
GAAGCGCCGC GCGAGGGCCA GCGGGTCGCC CAGCAGGTGC TGGCGCTGGA CGGCTACGGC
GTCTCGACCT CGGGCGATTA CCGCAACTAT TTCGAAGAGA ACGGCCAGCG CTATTCGCAC
ACCTTCGACC CGCGCACCGG CGCGCCGATC GACCATCACC TGGCTTCGGT CACGGTGCTC
GATCCGTCGA CGCGCAACGC CGACGGCCTG TCGACCCTGC TGATGGTGCT CGGTCCGGAA
GAGGGCTACC GTTTCGCCGA GAAGCACCGA CTGGCGGCGC TGTTCGTCAG TCGCCAGGGC
AACGGTTTCG ACAGCCGCAC CACGCCACGC TACGAGCAAC TGTTCGGCAA CCAAGGAGAA
CGTCCATGA
 
Protein sequence
MAEPFRPLAK AGLAALALVL AGCGDTLESF GGPTMGSTYS IKYVRGASAP DVQTAKAAVE 
AILAEVDRQM STYRDDSLVS RFNALPAQSC MELPPPMLEL LRYGGELSEQ SQGAFDMTVE
PLMNLWGFGP QARVEKVPSA EQIAAARRDV GHRHLRIDGQ RLCKDAAVQL DFDSIAAGYT
VDAVGERLKE LGVRSYLAEI TGELKAEGRK PDGTPWRIAI EAPREGQRVA QQVLALDGYG
VSTSGDYRNY FEENGQRYSH TFDPRTGAPI DHHLASVTVL DPSTRNADGL STLLMVLGPE
EGYRFAEKHR LAALFVSRQG NGFDSRTTPR YEQLFGNQGE RP