| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_25110 |
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| Symbol | topA |
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| ID | 4384430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2196651 |
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| End bp | 2199257 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639324583 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_790161 |
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| Protein GI | 116051012 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAT CGCTGGTCAT CGTGGAATCC CCGGCCAAGG CCAAGACCAT CAACAAGTAC
CTGGGTAGCC AGTACGTGGT GAAGTCGAGC ATCGGCCACA TCCGTGACCT GCCCACCAGT
GGTTCGTCGA GTTCCAAGGA GCCGGCGGCC AAGGGCCGCA AGAGCGCCTC CGAGGCGCCG
GCGCTGTCAC CGAAGGAGAA GGCCAGGCGC CAACTGGTCT CGCGCATGGG GGTCGACCCC
GAGCATGGCT GGAAGGCCAA GTACGAGATC CTGCCCGGCA AGGAAAAGGT CATCGACGAG
CTGCGCCGCC TGGCCAAGGA CGCCGACACC GTCTATCTCG CGACCGACTT GGACCGCGAA
GGGGAGGCCA TCGCCTGGCA CCTGCGGGAA GCCATCGGCG GTGACGAAAG CCGCTACAAG
CGCGTGGTAT TCAACGAAAT CACCAAGAAG GCCATTCAGG AGGCCTTCTC CCAGCCCGGC
GAGCTCGATA TCAACCGGGT GAACGCCCAG CAGGCGCGGC GTTTCCTCGA CCGCGTGGTC
GGCTACATGG TCTCGCCGCT GCTCTGGCAG AAGATTGCCC GCGGGTTGTC CGCCGGCCGC
GTGCAGTCGG TGGCGGTGAA GCTGGTGGTG GAGCGCGAAC GCGAGATCCG CGCCTTCGTC
CCGGAAGAGT ACTGGGAGGT GCATGCCGAC CTCGGTACCG CCAAGGGCGC CAACGTGCGC
TTCGAGGTTA CCCGTGAGAA GGGCGAGGCC TTCAAGCCGC TCAACGAAGC CCAGGCCATG
GCGGCCCTGG AAAAGCTCAA GGCGTCGGCC TATAGCGTCG CCAAGCGCGA GGACCGGCCG
ACCTCCAGCC GACCCTCGGC GCCGTTCATC ACTTCCACCC TGCAGCAGGC GGCGAGCAAC
CGCCTGGGCT TCGGGGTGAA GAAGACCATG ATGATGGCCC AGCGTCTCTA CGAGGCCGGC
TACATCACCT ACATGCGTAC CGACTCGACC AACCTGTCGG CCGATGCCAT TGGCATGGTC
CGCGGTTTCA TCGAGGACGA GTTCGGCCAG AAGTACCTGC CGGGCAAGGC CAACGTCTAC
TCGAGCAAGG AGGGCGCCCA GGAAGCGCAC GAGGCGATCC GTCCTTCCGA CGTCAACCTC
AAGCCGACCC AGCTGTCCGG CATGGAGCGC GACGCCGAGC GCCTGTACGA CCTGATCTGG
CGCCAATTCG TGGCGTGCCA GATGACCCCG GCCGAATACC TCTCGACCAG CGTGAGCGTC
ACCGCCGGCG ATTTCGAACT GCGCGCCAAG GGCCGCATCC TCAAGTTCGA CGGTTATACC
CGGGTACTGC CGCAGCAGAG CAAGCCGGGC GAGGACGACG TCCTGCCGGA AATGAAGGAA
GGCGAGAACC TCAAGCTGAT CAAGCTCGAT CCGAGCCAGC ACTTCACCAA GCCGCCGGCG
CGCTACTCCG AAGCGAGCCT GGTCAAGGAA CTGGAGAAGC GCGGTATCGG CCGCCCCTCG
ACCTACGCGG CGATCATCTC CACCATCCAG GAGCGCGGCT ACGTAACCAC CCACAACCGC
CGCTTCTATG CGGAGAAGAT GGGCGACATC GTCACCGATC GGCTCAACGA GAGCTTTGCC
AACCTGATGG ACTACGGTTT CACCGCCGGG ATGGAGGAGC ATCTCGACGA CGTGGCCCAG
GGCGAGCGCG ACTGGAAGCA CCTGCTCGAC GAGTTCTACG GCGATTTCAA GAAGAAGCTC
GAGGTGGCCG AAGTCAGCGA GAAGGGGATG CGCGCCAACC AGCCGACCCT GACCAACATT
CCCTGCCGCG AGTGCGGCCG GCCGATGATG ATTCGTACCG CCTCCACCGG CGTGTTCCTC
GGCTGCTCGG GCTACAGCCT GCCGCCGAAG GAACGTTGCA AGGCGACCGT CAACCTGATT
CCCGGCGACG AGATCGCCGC GGACGACGAG GGCGAGTCCG AGTCGCGGGT GTTGCGTGGC
AAGCATCGCT GCCCGATCTG CAGTACCGCG ATGGACGCCT ACCTGCTGGA CGAGAAACAC
AAGCTGCATA TCTGCGGCAA CAACCCCGAC TGTCCGGGCT ACGAGATCGA GGAAGGCCAG
TACCGGATCA AGGGCTACGA AGGGCCGAGC CTGGAATGCG ACAAGTGTGG CAGCGAGATG
CAGTTGAAGA CCGGCCGTTT CGGCAAGTTC TTCGGTTGCA CCAATCCGAC CTGCAAGAAC
ACCCGCAAGC TGCTGAAGAA TGGCGAGGCG GCGCCGCCGA AGATGGACGC CATCCGCATG
CCTGAATTGA AGTGCGAGAA GGTGGACGAT ATCTACGTGC TGCGCGACGG CGCTTCGGGC
ATGTTCCTGG CCGCCAGCCA GTTCCCGAAG AACCGCGAGA CCCGCGCGCC GTTGGTGAGC
GAGATCATCC CGCACAAGGC CGAGCTGGAT CCCAAGTACC ATTACCTCTG CGACGCCCCG
CAGAAAGACC CGGACGGCCG TCCCGCGGTG ATCCGTTTCA GCCGCAAGAC CAAGGAGCAA
TACGTGCAGT CCGAGGTCGA TGGCAAGCCC ACCGGCTGGC GCGCCTTCTA CGATGGCGGC
AAGTGGAAGG TCGAAGACAA GCGCTGA
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGSQYVVKSS IGHIRDLPTS GSSSSKEPAA KGRKSASEAP
ALSPKEKARR QLVSRMGVDP EHGWKAKYEI LPGKEKVIDE LRRLAKDADT VYLATDLDRE
GEAIAWHLRE AIGGDESRYK RVVFNEITKK AIQEAFSQPG ELDINRVNAQ QARRFLDRVV
GYMVSPLLWQ KIARGLSAGR VQSVAVKLVV EREREIRAFV PEEYWEVHAD LGTAKGANVR
FEVTREKGEA FKPLNEAQAM AALEKLKASA YSVAKREDRP TSSRPSAPFI TSTLQQAASN
RLGFGVKKTM MMAQRLYEAG YITYMRTDST NLSADAIGMV RGFIEDEFGQ KYLPGKANVY
SSKEGAQEAH EAIRPSDVNL KPTQLSGMER DAERLYDLIW RQFVACQMTP AEYLSTSVSV
TAGDFELRAK GRILKFDGYT RVLPQQSKPG EDDVLPEMKE GENLKLIKLD PSQHFTKPPA
RYSEASLVKE LEKRGIGRPS TYAAIISTIQ ERGYVTTHNR RFYAEKMGDI VTDRLNESFA
NLMDYGFTAG MEEHLDDVAQ GERDWKHLLD EFYGDFKKKL EVAEVSEKGM RANQPTLTNI
PCRECGRPMM IRTASTGVFL GCSGYSLPPK ERCKATVNLI PGDEIAADDE GESESRVLRG
KHRCPICSTA MDAYLLDEKH KLHICGNNPD CPGYEIEEGQ YRIKGYEGPS LECDKCGSEM
QLKTGRFGKF FGCTNPTCKN TRKLLKNGEA APPKMDAIRM PELKCEKVDD IYVLRDGASG
MFLAASQFPK NRETRAPLVS EIIPHKAELD PKYHYLCDAP QKDPDGRPAV IRFSRKTKEQ
YVQSEVDGKP TGWRAFYDGG KWKVEDKR
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