Gene PA14_24060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_24060 
SymbolxcpW 
ID4381098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2088952 
End bp2089665 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID639324493 
Productgeneral secretion pathway protein J 
Protein accessionYP_790075 
Protein GI116051094 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR01711] general secretion pathway protein J 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTAC AGCGGGGCTT CACCCTGCTC GAGCTGCTGA TCGCCATCGC CATCTTCGCC 
CTGCTGGCCC TGGCCACCTA CCGCATGTTC GACAGCGTGA TGCAGACCGA CCAGGCGACT
CGCGTGCAGG AGCAGCGCAT GCGCGAGCTG GTGCGGGCGA TGGGCGCCCT GGAGCGCGAC
CTGACCCAGG CGGTCGAACG TCCGGTACGC GACGAACTGG GCGATAACCG TGGCGCCTTC
CTCAGCGAGG GCGAGAACGA CCAGATCGTC GAATTCACCC GTGGCGGCTG GCGCAACCCG
CTCGGCCAGG CGCGCTCGCG CCTGCAGCGG GTGCGCTGGT CGCTGTCCGG GGAGACCCTC
GAACGCCGCT ACTGGCTGGT TCTGGACCGC GCCCAGGACA GCAAGCCACG GGTGCAGCAG
GTGCTGGACG GGGTTACCGC GCTGAGCTGG CGCTTCCTCG ACAAGGAGCA CAACTGGCAG
GGCCACTGGC CGACCGACGA AGGCAGCGAG GAGGAGCGCC TGGAAAGCCT GCCGCTGGCG
GTGGAGATGA CCCTGGAGCA CCGCCACTAC GGCAAGCTGG TGCGCGTCTG GCGTCTGCTC
GATCCGCCGC TCAAGCAGGA CCAGCCGCAG GGCCAGCCGG GCGGCGAGAA TGGCGAGAAC
GGCGAGGGCG GGGTGCCGCA GCCGCCGGAA GGCATGCCGG GGGCGCCGGA ATGA
 
Protein sequence
MRLQRGFTLL ELLIAIAIFA LLALATYRMF DSVMQTDQAT RVQEQRMREL VRAMGALERD 
LTQAVERPVR DELGDNRGAF LSEGENDQIV EFTRGGWRNP LGQARSRLQR VRWSLSGETL
ERRYWLVLDR AQDSKPRVQQ VLDGVTALSW RFLDKEHNWQ GHWPTDEGSE EERLESLPLA
VEMTLEHRHY GKLVRVWRLL DPPLKQDQPQ GQPGGENGEN GEGGVPQPPE GMPGAPE