| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23970 |
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| Symbol | xcpQ |
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| ID | 4381105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2081960 |
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| End bp | 2083936 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639324486 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_790068 |
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| Protein GI | 116051101 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.598956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAC CTTTGCTCCG CGCCCTGTTT GCCCCTTCCA GTCGTTCGTA CGTTCCCGCC
GTCCTTCTCA GCCTGGCCCT CGGCATCCAG GCGGCGCACG CCGAAAACAG CGGCGGGAAC
GCCTTCGTCC CGGCCGGCAA CCAGCAGGAG GCGCACTGGA CGATCAACCT CAAGGATGCC
GACATCCGCG AATTCATCGA CCAGATTTCC GAAATCACCG GCGAGACCTT CGTCGTCGAC
CCGCGGGTCA AGGGCCAGGT CAGCGTGGTC TCCAAGGCCC AGCTCTCGTT GAGCGAGGTC
TACCAGTTGT TCCTCTCGGT GATGAGCACC CACGGCTTCA CCGTGGTTGC CCAGGGCGAC
CAGGCGCGCA TCGTGCCCAA CGCCGAGGCC AAGACCGAGG CCGGCGGCGG CCAGAGCGCG
CCGGATCGCC TGGAGACGCG GGTGATCCAG GTGCAGCAGA GCCCGGTATC GGAACTCATC
CCGCTGATCC GTCCGCTGGT CCCACAATAT GGCCACCTCG CCGCGGTGCC CTCGGCCAAC
GCGCTGATCA TCAGCGACCG CAGCGCCAAT ATCGCGCGAA TCGAAGACGT GATCCGCCAG
CTCGACCAGA AGGGCAGCCA CGACTACAGC GTGATCAACC TGCGCTACGG CTGGGTGATG
GACGCCGCCG AGGTGCTCAA CAACGCCATG AGCCGCGGCC AGGCCAAGGG CGCGGCGGGC
GCCCAGGTGA TCGCCGACGC GCGCACCAAC CGCCTGATCA TCCTCGGCCC GCCGCAGGCG
CGCGCCAAGC TGGTGCAACT GGCGCAGTCG CTGGACACCC CGACCGCGCG CTCGGCCAAT
ACCCGGGTGA TCCGCCTGCG CCACAACGAC GCCAAGACCC TCGCGGAAAC CCTCGGCCAG
ATTTCCGAAG GCATGAAGAA CAACGGCGGC CAGGGCGGCG AACAGACCGG CGGCGGCCGA
CCGAGCAACA TCCTGATCCG TGCCGACGAA AGCACCAACG CCCTGGTCCT GCTGGCCGAC
CCGGACACGG TCAACGCCCT CGAGGACATC GTTCGCCAGC TCGACGTGCC GCGTGCCCAG
GTATTGGTGG AGGCGGCCAT CGTCGAGATC TCCGGCGACA TCCAGGATGC CGTCGGCGTG
CAATGGGCGA TCAACAAGGG CGGCATGGGC GGAACCAAGA CCAACTTCGC CAATACCGGA
CTGTCCATCG GCACCCTGCT GCAATCGCTC GAGAGCAACA AGGCACCGGA ATCCATCCCC
GACGGCGCCA TCGTCGGCAT CGGCAGCAGC AGCTTCGGCG CGCTGGTCAC CGCGCTCTCG
GCCAACACCA AGAGCAACCT GCTGTCGACC CCGAGCCTGT TGACCCTGGA CAACCAGAAA
GCGGAGATTC TGGTCGGCCA GAACGTACCG TTCCAGACCG GCTCCTACAC CACCAACAGC
GAAGGTTCGA GCAACCCGTT CACCACCGTG GAGCGCAAGG ATATCGGCGT CAGCCTCAAG
GTCACTCCGC ACATCAACGA CGGCGCGGCC CTGCGCCTGG AGATCGAGCA GGAGATCTCG
GCCCTGCTGC CCAACGCCCA GCAGCGCAAC AATACCGACC TGATCACCAG CAAGCGCTCG
ATCAAGAGCA CCATCCTCGC CGAGAACGGC CAGGTGATCG TGATCGGCGG CCTGATCCAG
GACGACGTTT CCCAAGCCGA GTCGAAGGTT CCCCTGCTCG GGGACATCCC ATTCCTCGGT
CGCCTGTTCC GTTCCACCAA GGACACCCAC ACCAAGCGCA ACCTGATGGT CTTCCTGCGT
CCTACGGTGG TCCGCGACAG CGCCGGTCTC GCCGCGCTCT CGGGCAAGAA ATACAGCGAC
ATCCGGGTCA TCGACGGCAC TCGCGGCCCG GAGGGACGAC CCAGCATCCT GCCGACCAAC
GCCAACCAGT TGTTCGATGG ACAGGCCGTC GATCTGCGCG AACTGAAGAC GGAATAA
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| Protein sequence | MSQPLLRALF APSSRSYVPA VLLSLALGIQ AAHAENSGGN AFVPAGNQQE AHWTINLKDA
DIREFIDQIS EITGETFVVD PRVKGQVSVV SKAQLSLSEV YQLFLSVMST HGFTVVAQGD
QARIVPNAEA KTEAGGGQSA PDRLETRVIQ VQQSPVSELI PLIRPLVPQY GHLAAVPSAN
ALIISDRSAN IARIEDVIRQ LDQKGSHDYS VINLRYGWVM DAAEVLNNAM SRGQAKGAAG
AQVIADARTN RLIILGPPQA RAKLVQLAQS LDTPTARSAN TRVIRLRHND AKTLAETLGQ
ISEGMKNNGG QGGEQTGGGR PSNILIRADE STNALVLLAD PDTVNALEDI VRQLDVPRAQ
VLVEAAIVEI SGDIQDAVGV QWAINKGGMG GTKTNFANTG LSIGTLLQSL ESNKAPESIP
DGAIVGIGSS SFGALVTALS ANTKSNLLST PSLLTLDNQK AEILVGQNVP FQTGSYTTNS
EGSSNPFTTV ERKDIGVSLK VTPHINDGAA LRLEIEQEIS ALLPNAQQRN NTDLITSKRS
IKSTILAENG QVIVIGGLIQ DDVSQAESKV PLLGDIPFLG RLFRSTKDTH TKRNLMVFLR
PTVVRDSAGL AALSGKKYSD IRVIDGTRGP EGRPSILPTN ANQLFDGQAV DLRELKTE
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