Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23830 |
Symbol | fimV |
ID | 4381115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2070083 |
End bp | 2072857 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324476 |
Product | pilus assembly protein |
Protein accession | YP_790058 |
Protein GI | 116051111 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3170] Tfp pilus assembly protein FimV |
TIGRFAM ID | [TIGR03504] FimV C-terminal domain [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0199592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.717366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGGC TTCGTACACT GGTTCGGGCA ATCGCGGCGG CCTCGGTCCT GACTTCCGGC ATGGCGCATG GATTGGGACT GGGGGAAATC ACCCTGAAGT CGGCGTTGAA CCAACCGTTG GATGCCGAGA TCGAGCTGCT CGAAGTTCGT GACCTGGGTT CGGGCGAGGT GATCCCGAGC CTGGCGTCGC CGGAAGAGTT CAGCAAGGCG GGCGTCGATC GCCTGTACTA CCTCACCGAC CTGAAGTTCA CGCCGGTGGT GAAGCCCAAC GGCAAGAGCG TCATTCGCGT GACCTCGTCG AAGCCGGTGC AGGAGCCCTA CCTGAACTTC CTGGTCCAGG TGCTCTGGCC GAACGGCCGC CTGCTGCGCG AGTACACCGT CCTGCTGGAT CCGCCGCTGT ACTCCCCGCA GGCCGCGGCA AGCGCTCCGC AAGCGCCGGT CAGCGCGCCG CGCGCGACCG GCGCCCCGCG AACCCCGCAG GCGCCGGCTC CGGTGCGTAC CACCGCGCCG GCAGGCAGCG ACACCTATCG CACCGTTTCC AACGACACGC TCTGGGAGAT CGCCCAGCGC AACCGTACCG ATCGCGTTTC CGTACCCCAG GCGATGCTCG CGTTCCAGGA ACTGAATCCG GGCGCCTTCG TCGATGGCAA CATCAACCGG CTGAAGAGCG GCCAGGTCCT GCGCATTCCC ACCGAACAGC AGATGCTGGA GCGCTCGCCG CGCGAGGCGC TGTCCCAGGT GCAGGCGCAG AACCAGAGCT GGCGCGGCAG CCGCAATCCG GCCGCGGGCA CCGCTGGCGC CAGGCAGTTG GATGCGACCC AGCGCAATGC CGCCGGGTCG GCGCCATCCA AGGTCGACGC CACGGACAAC CTGCGCCTGG TGTCTGGCGA GGGCAAGGCC AGCAAGGGTG CCGACAAGGG CGGGAAGGGC GACAGCAAGG CGATCGCCGA TACCCTGGCG GTGACCAAGG AAAGCCTCGA TAGCACTCGC CGCGAGAACG AAGAACTGCA GAGCCGCATG CAGGATCTGC AGAGCCAGCT GGACAAGCTG CAGAAGTTGA TCCAGTTGAA GGACGCCCAG TTGGCCAAGC TGCAAGGGCA GTTGGGCGCC GAAGGCCAGG GCGCAGCCCA GCCGAACGCA GCCCTGCCGG ATGCGTCCCA GCCCAATGCA GCCGCGCAGG CGCCGGCTCA GCCCGGGACT CCCGCTGCGG CAGCGCCGAC TCCTGCTCCG GCCGGAGAAG CACCCGCCGC TCCGGCGCAG CCTCCGGTGG CGCCGCCGCC CGCGCCAGTT GCCGAGAAGC CTCCGGCACC TGCCGTTCCG GCGCCCGCTC CGGTACAGGC GGCAGAACAG CCGGCACCGA GCTTCCTCGA CGAACTGCTG GCCAACCCGC TGTGGTTGGC GGTGATCGGC GGTAGTGCAC TGCTGGCGTT GCTGGTGCTG CTGATGATCC TGTCGCGGCG CAATGCGCAG AAAGAGAAGG AAGAAGCCCA GGCTTTCGCC GCGGATGCCG GCGAGGAACA GGAGGATGCG CTGGACCTGG GAAAGGACGG CTTCGACGAC CTGACCCTCG ACGAGCCTGA ACCGCAGGTC GCAGCCGCTG CGCCGCAGGT CGAGAAGACC ACTGCGCAGA CTTCCGATGC GCTGGGCGAG GCCGACATCT ATATCGCCTA CGGGCGTTTC AACCAGGCCG CCGAACTGTT GCAGAACGCC ATCTACGACG AGCCGCAGCG CACCGACCTG CGCCTCAAGC TGATGGAAGT CTATGCCGAG ATGGGCGATC GCGAAGGTTT CGCTCGCCAG GAAAACGAGC TGCGCGAAAT CGGCGGCGCA CAGCCGCAGG TCGAGCAGCT CAAGTCGCGC TACCCGGCAA TGGTCGCGGT CGCCGCGGTT GCCGGCCTGG CCGGCGCCAA GCTGGCGCAG GACGAGCTGG ATAGCTTCAG CCTCGACGAC CTGTCGCTCG ACGACAGCGG TCACGCGGCC AAGCCGGATG CGGCAGGACA GGATCTCGAC GACGCCTTCG ACCTGAGCCT GGACGACCTG GGCGGCGGCG ATCTTGGCAG CGACGACGTG CAGGCCGATC TCAAGTCCGA CAGCGGGGCG CTGGACGACC TGACCCTGGA CAGCGATCTG GACCTGGCGG CCTCGACCGC GGCGGACAAG CCTGTCGACG ATCTCGACTT CGGCCTGGAT TTCGCGGAGT TGGCAGAGAC TCCGAGCCAA CCCAAGCATG ACGACCTGGG CGATTTCTCC CTGGATCTCG ATGCGCCGGA AGACAAGCTT TCGGACGACG ACTTCCTGCT TTCGCTGAAC GACGAGGTGC CCGCCGCGGC GCCAGCCAAC AACGAATTCA CCCTCGATAC CGAGGCTGCC GAAGAGCCGG CGTTGTCCCT GCCGGACGAC TTCGACCTGT CGCTGGCCGA CGAGCCGACG GAGCCGGCCG CTCCGGAGAA GGGCGAGGAC AGTTTCGCCG CCCAGTTGGA CGAGGTGAGT GCGCAGTTGG ACGAGTTGGC CAGCAACCTT GACGAGCCGA AGAGCGCGGC GCCGAGTTTC TCCGCCGAGG ATGCAGCGGT CGCCTCCGCC CTGGACGGAG ACGCCGACGA TGACTTCGAC TTCCTCTCCG GTGCCGACGA AGCGGCGACC AAGCTGGATC TGGCTCGCGC CTACATCGAC ATGGGCGATA GCGAAGGCGC GCGCGATATC CTCGACGAAG TCCTGGCCGA AGGTAACGAC AGCCAGCAGG CGGAAGCCCG CGAGTTGCTG GAGCGCCTGG CCTGA
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Protein sequence | MVRLRTLVRA IAAASVLTSG MAHGLGLGEI TLKSALNQPL DAEIELLEVR DLGSGEVIPS LASPEEFSKA GVDRLYYLTD LKFTPVVKPN GKSVIRVTSS KPVQEPYLNF LVQVLWPNGR LLREYTVLLD PPLYSPQAAA SAPQAPVSAP RATGAPRTPQ APAPVRTTAP AGSDTYRTVS NDTLWEIAQR NRTDRVSVPQ AMLAFQELNP GAFVDGNINR LKSGQVLRIP TEQQMLERSP REALSQVQAQ NQSWRGSRNP AAGTAGARQL DATQRNAAGS APSKVDATDN LRLVSGEGKA SKGADKGGKG DSKAIADTLA VTKESLDSTR RENEELQSRM QDLQSQLDKL QKLIQLKDAQ LAKLQGQLGA EGQGAAQPNA ALPDASQPNA AAQAPAQPGT PAAAAPTPAP AGEAPAAPAQ PPVAPPPAPV AEKPPAPAVP APAPVQAAEQ PAPSFLDELL ANPLWLAVIG GSALLALLVL LMILSRRNAQ KEKEEAQAFA ADAGEEQEDA LDLGKDGFDD LTLDEPEPQV AAAAPQVEKT TAQTSDALGE ADIYIAYGRF NQAAELLQNA IYDEPQRTDL RLKLMEVYAE MGDREGFARQ ENELREIGGA QPQVEQLKSR YPAMVAVAAV AGLAGAKLAQ DELDSFSLDD LSLDDSGHAA KPDAAGQDLD DAFDLSLDDL GGGDLGSDDV QADLKSDSGA LDDLTLDSDL DLAASTAADK PVDDLDFGLD FAELAETPSQ PKHDDLGDFS LDLDAPEDKL SDDDFLLSLN DEVPAAAPAN NEFTLDTEAA EEPALSLPDD FDLSLADEPT EPAAPEKGED SFAAQLDEVS AQLDELASNL DEPKSAAPSF SAEDAAVASA LDGDADDDFD FLSGADEAAT KLDLARAYID MGDSEGARDI LDEVLAEGND SQQAEARELL ERLA
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