Gene PA14_23790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23790 
SymbolleuB 
ID4381118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2066538 
End bp2067620 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID639324473 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_790055 
Protein GI116051114 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0915643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AGATCCTGGT TCTCCCCGGT GACGGTATCG GTCCGGAAAT CATGGCGGAA 
GCGGTCAAGG TGCTGGAGCT GGCCAACGAC AGGTTCCAGC TCGGCTTCGA ACTGGCCGAG
GACGTCATCG GTGGCGCGGC CATCGACAAG CACGGCGTGC CGCTGGCCGA CCAGACCCTG
CAGCGCGCGC GCCAGGCCGA TGCGGTGCTG CTGGGCGCGG TAGGAGGGCC GAAATGGGAC
AGGATCGAAC GCGATATCCG TCCCGAGCGC GGTCTGCTGA AGATTCGTTC GCAACTGGGC
CTGTTCGCCA ACCTGCGTCC GGCCATCCTC TACCCGCAAC TGGCCGCGGC CTCCAGCCTG
AAGCCGGAAG TGGTCGCCGG GCTGGACATC CTCATCGTCC GCGAACTGAC CGGCGGCATC
TACTTCGGCC AGCCCCGCGA GCAGCGCGTG CTGGAGAACG GCGAGCGCCA GGCCTACGAC
ACCCTGCCGT ACAGCGAGAG CGAAATCCGT CGTATCGCCC GCGTCGGTTT CGACATGGCC
CGCGTACGCA ACAACAGGCT CTGCTCGGTG GACAAGGCCA ACGTCCTCGC CTCCAGCCAA
CTGTGGCGGG AAGTGGTGGA AGAAGTGGCG AAGGACTACC CGGACGTCGA GCTTTCCCAT
ATGTACGTGG ACAACGCCGC CATGCAGCTG GTGCGCGCGC CCAAGCAGTT CGACGTGATG
GTCACCGACA ACATGTTCGG CGACATCCTG TCGGATGAGG CTTCCATGCT GACCGGTTCC
ATCGGCATGC TGCCTTCTGC CTCGCTCGAC GCGAACAACA AGGGCATGTA CGAACCCTGC
CACGGTTCCG CCCCGGACAT CGCCGGTCAG GGCATCGCCA ACCCGTTGGC GACCATCCTC
TCGGTCTCGA TGATGCTGCG CTACAGCTTC AGCCAGGCGA CCGCCGCCGA CGCCATCGAG
CAGGCGGTGA GCAAGGTCCT CGACCAGGGG CTGCGCACCG GCGACATCTG GTCCGAAGGC
TGCCGCAAGG TCGGCACCCG GGAAATGGGC GATGCCGTAG TCGCGGCACT CAAGAATCTG
TAA
 
Protein sequence
MSKQILVLPG DGIGPEIMAE AVKVLELAND RFQLGFELAE DVIGGAAIDK HGVPLADQTL 
QRARQADAVL LGAVGGPKWD RIERDIRPER GLLKIRSQLG LFANLRPAIL YPQLAAASSL
KPEVVAGLDI LIVRELTGGI YFGQPREQRV LENGERQAYD TLPYSESEIR RIARVGFDMA
RVRNNRLCSV DKANVLASSQ LWREVVEEVA KDYPDVELSH MYVDNAAMQL VRAPKQFDVM
VTDNMFGDIL SDEASMLTGS IGMLPSASLD ANNKGMYEPC HGSAPDIAGQ GIANPLATIL
SVSMMLRYSF SQATAADAIE QAVSKVLDQG LRTGDIWSEG CRKVGTREMG DAVVAALKNL