Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23750 |
Symbol | leuC |
ID | 4381121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2063572 |
End bp | 2064996 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324470 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_790052 |
Protein GI | 116051117 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0168844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCA AGACCCTCTA CGACAAACTC TGGGACATGC ACCTGGTCAA GCAGCGCGAC GACGGTTCGG CGCTGATCTA CATCGACCGC CATATCCTGC ACGAAGTGAC CTCGCCGCAG GCCTTCGAGG GTCTTCGCCT GGCCGGGCGC AAGCCGTGGC GGATCGACGC CAACATTGCC ACCCCGGACC ACAACGTGCC GACCACCCGC ACCGAGCGCA AGGGCGGCAT CGCCGCCATC GCCGACGAGG TCTCGCGCCT GCAGGTGCAG ACCCTCGACG AGAACTGCGA TGACTTCGGC ATCACCGAAT TCAAGATGAA CGACGTGCGC CAGGGCATCG TCCATGTGGT CGGTCCGGAG CAGGGCGCGA CCCTCCCGGG GATGACCGTG GTCTGCGGCG ACTCGCACAC TTCCACCCAC GGCGCCTTCG GCGCGCTGGC CCACGGCATC GGCACTTCCG AGGTCGAGCA TGTGCTGGCG ACCCAGTGCC TGGTGGCGAA GAAGATGAAG AACATGCTGG TCAAGGTCGA AGGCAGGTTG CCGGCCGGCG TCACGGCGAA GGATATCGTC CTCGCGGTGA TCGGCAGGAT CGGCACCGCC GGCGGCAACG GCCACGCCAT CGAGTTCGCC GGCAGCGCCA TCCGCGACCT GTCCATCGAA GGGCGGATGA CCATCTGCAA CATGTCGATC GAGGCGGGCG CCCGCGTCGG CCTGGTCGCC GTCGACCAGA AGACCATCGA CTACGTGAAG GGCCGGCCCT TCGCGCCGAG CGCCGAGCAA TGGGACCAGG CCGTCGCCTG CTGGCAGGGG CTGGTGTCGG ACGCCGATGC CCGCTTCGAT ACCGTGGTCG AGCTGGACGC CGCGCAGATC AAGCCGCAGG TCAGCTGGGG CACGTCGCCG GAAATGGTCC TGGCCGTGGA CCAGAACGTG CCGGACCCGG CCCGCGAGAG CGACCCGATC AAGCGCGGTT CGATCGAGCG CGCCTTGAAG TACATGGGCC TGCGGCCGAA CCAGGCGATC ACCGACATCC AGCTGGACCG GGTATTCATC GGTTCCTGCA CCAACTCGCG GATCGAGGAC CTGCGCGCTG CCGCCGAAGT GGCCAGGGGC CGCAAGGTCG CCGCGACCAT CAAACAGGCG CTGGTGGTGC CGGGTTCCGG GTTGGTCAAG GAGCAGGCCG AGAAGGAAGG CCTGGACCGG ATCTTCATCG AGGCCGGCTT CGAATGGCGC GAGCCGGGCT GTTCCATGTG CCTGGCGATG AACCCGGACC GGCTGGAGAG CGGCGAACAC TGCGCCTCGA CCTCCAACCG CAACTTCGAG GGCCGTCAGG GCGCCGGTGG CCGTACCCAC CTGGTCAGCC CGGCGATGGC CGCCGCCGCG GCCGTCAACG GCCGCTTCAT CGATGTCCGC GAATTGCTCG CCTGA
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Protein sequence | MAGKTLYDKL WDMHLVKQRD DGSALIYIDR HILHEVTSPQ AFEGLRLAGR KPWRIDANIA TPDHNVPTTR TERKGGIAAI ADEVSRLQVQ TLDENCDDFG ITEFKMNDVR QGIVHVVGPE QGATLPGMTV VCGDSHTSTH GAFGALAHGI GTSEVEHVLA TQCLVAKKMK NMLVKVEGRL PAGVTAKDIV LAVIGRIGTA GGNGHAIEFA GSAIRDLSIE GRMTICNMSI EAGARVGLVA VDQKTIDYVK GRPFAPSAEQ WDQAVACWQG LVSDADARFD TVVELDAAQI KPQVSWGTSP EMVLAVDQNV PDPARESDPI KRGSIERALK YMGLRPNQAI TDIQLDRVFI GSCTNSRIED LRAAAEVARG RKVAATIKQA LVVPGSGLVK EQAEKEGLDR IFIEAGFEWR EPGCSMCLAM NPDRLESGEH CASTSNRNFE GRQGAGGRTH LVSPAMAAAA AVNGRFIDVR ELLA
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