| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23130 |
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| Symbol | |
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| ID | 4381170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2005423 |
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| End bp | 2006346 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639324418 |
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| Product | sensory box GGDEF domain-containing protein |
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| Protein accession | YP_790003 |
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| Protein GI | 116051166 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.561543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0000866239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTCCTC CCAAGCAGTC CAATACCATC GATTTCGACG CCGCCAAGCA GAAGCGCGGC
CCCCAGCCCG GCGGCAACGC CAGCGGGCCG CGCGCCAGCA ACCTGACGGA GTTGCGCCAG
CAACTGACCC TACAGTTGCA GAGCAGCCTG GAGGCGGAGC GGATTCTCGG CCTGTTCTTC
GAGGAAGTCC GCCAACTGAT CCCGCTGGAC GCCCTTGGCT ACCGCCATCC GGGCTCCGAC
CTGCGCCTGG AGTTCGGCAG CAGCGCCAAG CATTCGGTGA GCTATCGCCT GAGCCATGAC
AGCGACTACC TCGGCGAACT GATCTTCCGT CGCCGCCAGC GCCTCGGCGA AGACGAACAA
CGGCAACTGG AGAGCCTGCT CGGCACCCTG CTGTTCCCGC TGCGCAACGC CCTGCTCTAT
CGCGCCGCGA TCCAGACCGC CCTGCGCGAC GCCCTGACCG GCACCGGCAA CCGCATCGCC
ATGGACCAGG CGCTCGGCCG CGAACTGGAA CTGGCCCGGC GCAACCTGCA ACCGCTCTCG
GTGCTGATGC TCGATATCGA CCACTTCAAG CGGGTCAACG ACCACTACGG TCACGCCGTC
GGCGACGAAG CCCTCAAGGC CGTGGCGGAA ACCATCAAGG ACCACCTGCG CAATGTCGAC
ATGGTGTTCC GCTTCGGCGG CGAGGAATTC CTCGTCCTGC TGTCCAGCAC GCCGCTGCAG
GCTGCCTGCA TGGTCGGCGA ACGCCTGCGC CAGGCGGTGG AGGAACTGGA CTACCGGCAC
GCCGGCGAAC CGCTGAAGCT GTCGATCAGC CTCGGTTGCG CCGACCTGCG GCCCGGCGAA
GGCAGCGACG ACCTGCTGCG ACGGGTCGAC GAGGCGCTCT ACGAAGCCAA GCGCGACGGC
CGCAACCGCC TGCGCTGCGC CTGA
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| Protein sequence | MAPPKQSNTI DFDAAKQKRG PQPGGNASGP RASNLTELRQ QLTLQLQSSL EAERILGLFF
EEVRQLIPLD ALGYRHPGSD LRLEFGSSAK HSVSYRLSHD SDYLGELIFR RRQRLGEDEQ
RQLESLLGTL LFPLRNALLY RAAIQTALRD ALTGTGNRIA MDQALGRELE LARRNLQPLS
VLMLDIDHFK RVNDHYGHAV GDEALKAVAE TIKDHLRNVD MVFRFGGEEF LVLLSSTPLQ
AACMVGERLR QAVEELDYRH AGEPLKLSIS LGCADLRPGE GSDDLLRRVD EALYEAKRDG
RNRLRCA
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