| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23030 |
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| Symbol | oprB |
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| ID | 4381179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1996676 |
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| End bp | 1998040 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639324409 |
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| Product | glucose/carbohydrate outer membrane porin OprB precursor |
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| Protein accession | YP_789994 |
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| Protein GI | 116051175 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0211738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGA ACAAGAAAAC CAGACCGGCC GCCAGGACCG TTGGCTGCCT GTTTGCCCTT
GGAGCGCTGG GCTTGGGGAG CGCGGCGCAC GCCGCCGAGG CGTTCTCCCC GAACTCGAAA
TGGATGCTCG GCGATTGGGG CGGCAAGCGC ACCGAGCTGC TGGAGAAGGG CTACGACTTC
AAGCTGGAGT ACGTCGGCGA GGCGGCGGCC AACCTCGATG GCGGCTATGA CGACGACAAG
ACCGGACGCT ACACCGACCA GTTCGCCCTG GGCGTGCACA TGGACCTGGA GAAGATCCTC
GGCTGGAAGG CTACCGAGTT CCAGTTCACC GTCACCGAGC GCAACGGCAA GAACCTTTCC
AACGACCGCA TCGGCGACCC GCGTGCCGGG CACATCAGCT CGGTGCAGGA GGTCTGGGGC
CGCGGGCAGA CCTGGCGGCT GACCCAGCTG TGGCTCAAGC AGCAGTACTT CGACGGCGCG
CTGGACGTGA AATTCGGCCG TTTCGGCGAG GGCGAGGACT TCAACAGCTT CCCCTGCGAT
TTCCAGAACC TGGCCTTCTG CGGCTCGCAG GTGGGCAACT GGGCGGGGAG CATCTGGTAC
AACTGGCCGG TCAGCCAGTG GGCGTTGCGG GTGAAGTACA ACTTCGCGCC GGACTGGTAC
GTGCAGGTCG GCGCCTACGA GCAGAACCCG TCGAACCTGG AGACCGGCAA CGGCTTCAAG
ATGAGCGGCA GCGGGACCAA GGGCGCGCTG CTGCCGGTGG AGCTGATCTG GCAGCCGAAG
GTCGGCGCCG AGCAACTGCC GGGCGAGTAC CGGCTGGGCT ACTACTACAG CACGGCGAAG
GCCGATGACG TCTACGACGA CGTCGACGGC CAGCCGCAGG GGCTGACCGG CAACGACTTC
AAGTCGCGCG GCAGCAAGCA TGGCTGGTGG GTGGTGGCGC AGCAGCAGGT CACTTCGCAC
AACGGCGATG CTTCGCGCGG GTTGAGCCTG TTCGCCAACC TGACGGTCCA CGACAAGGCG
ACCAACGTGG TGGACAACTA CCAGCAGCTC GGGGTGGTCT ACAAGGGTCC GTTCGATGCG
CGGCCGAAGG ACGACATCGG CCTGGGCATC GCGCGCATCC ACGTCAACGA CGATGTGAAG
AAGCGCCAGC GCCTGGTGAA CCAGGTGAAC GGCATCGACG ATTACGACAA CCCGCTGTAC
CAGCCGCTGC AGGACACCGA GTACAACGCC GAGCTGTACT ACGGGGTGCA TGTGACCGAC
TGGCTGACGG TGCGGCCGAA CCTGCAATAC ATCAAGCAGC CGGGCGGGGT CGACGAGGTC
GACAACGCGC TGGTGGCGGG GATCAAGATC CAGACGGTGT TCTGA
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| Protein sequence | MYKNKKTRPA ARTVGCLFAL GALGLGSAAH AAEAFSPNSK WMLGDWGGKR TELLEKGYDF
KLEYVGEAAA NLDGGYDDDK TGRYTDQFAL GVHMDLEKIL GWKATEFQFT VTERNGKNLS
NDRIGDPRAG HISSVQEVWG RGQTWRLTQL WLKQQYFDGA LDVKFGRFGE GEDFNSFPCD
FQNLAFCGSQ VGNWAGSIWY NWPVSQWALR VKYNFAPDWY VQVGAYEQNP SNLETGNGFK
MSGSGTKGAL LPVELIWQPK VGAEQLPGEY RLGYYYSTAK ADDVYDDVDG QPQGLTGNDF
KSRGSKHGWW VVAQQQVTSH NGDASRGLSL FANLTVHDKA TNVVDNYQQL GVVYKGPFDA
RPKDDIGLGI ARIHVNDDVK KRQRLVNQVN GIDDYDNPLY QPLQDTEYNA ELYYGVHVTD
WLTVRPNLQY IKQPGGVDEV DNALVAGIKI QTVF
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