Gene PA14_22990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_22990 
Symbol 
ID4381182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1993669 
End bp1994601 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID639324406 
Productputative permease of ABC sugar transporter 
Protein accessionYP_789991 
Protein GI116051178 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.155335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA ATTCCCCTGT CTATCCCACG GCTCCGGTAG CGCCTCGTCG CGTCTCGCCG 
CTCGATCGCC TGCAAGGCTG GCTGCCGAAG CTGGTGCTGG CGCCAAGCGT GGTCGTGGTG
CTGTTCTGCA TGTATGGCTA CATCGGCTGG ACGCTGCTGC TGTCCTTCAC CAACTCGCGC
TTCATGCCCA GCTACAAGTG GGCCGGGCTG AGCCAGTACC AGCGCCTGTG GGACAACGAC
CGCTGGTGGG TGGCGAGCAA GAACCTGCTG CTCTTCGGCG GCTCGTTCAT CGCCATCTGC
CTGGTGCTCG GAGTGTTCCT CGCAGTGCTG CTGGACCAGC GCATCCGCCG CGAAGGCTTC
ATCCGTACCC TCTACCTGTA TCCCATGGCG TTGTCGATGA TCGTCACCGG CACCGCCTGG
AAGTGGCTGC TCAATCCGGG CCTGGGCCTG GACAAGCTGC TCCGCGACTG GGGCTGGGAA
GGTTTCCGCT TCGACTGGCT GGTGGACCCG GAGCGGGTCG TCTACTGCCT GGTGATCGCC
GCCGTGTGGC AGGCCTCCGG CTTCGTCATG GCGCTGTTCC TCGCCGGCCT GCGCGGGGTC
GACCCGGCCA TCGTGCGCGC CGCCCAGGTC GACGGTGCGA GCCTGCCGAC CATCTACCTG
CGCATCGTCC TGCCGAGCCT GCGCCCGGTG TTCTTCAGCG CGCTGATGAT TCTCGCCCAT
ATCGCGATCA AGAGCTTCGA CCTGGTAGCG GCGATGACCG CCGGCGGGCC GGGTTATTCC
TCCGACCTGC CGGCGATGTT CATGTATGCG CATACCTTCA CCCGTGGCCA GATGGGGCTC
GGCGCGGCGA GCGCGATGCT GATGCTCGGC GCGGTACTGG CGATCGTGGT GCCTTACCTG
TATTCCGAAC TGCGAGGCAA GCGCCATGCG TGA
 
Protein sequence
MATNSPVYPT APVAPRRVSP LDRLQGWLPK LVLAPSVVVV LFCMYGYIGW TLLLSFTNSR 
FMPSYKWAGL SQYQRLWDND RWWVASKNLL LFGGSFIAIC LVLGVFLAVL LDQRIRREGF
IRTLYLYPMA LSMIVTGTAW KWLLNPGLGL DKLLRDWGWE GFRFDWLVDP ERVVYCLVIA
AVWQASGFVM ALFLAGLRGV DPAIVRAAQV DGASLPTIYL RIVLPSLRPV FFSALMILAH
IAIKSFDLVA AMTAGGPGYS SDLPAMFMYA HTFTRGQMGL GAASAMLMLG AVLAIVVPYL
YSELRGKRHA