| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_22760 |
|---|
| Symbol | cpxR |
|---|
| ID | 4381198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1978689 |
|---|
| End bp | 1979366 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639324390 |
|---|
| Product | putative two-component response regulator |
|---|
| Protein accession | YP_789975 |
|---|
| Protein GI | 116051194 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0539892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC TGCTGTTGAT CGACGATGAC CGGGAGCTCT GCGAGCTGCT CGGTACCTGG
CTGGTCCAGG AAGGTTTCTC CGTGCGTGCC AGCCACGACG GCGCCCAGGC CCGTCGCGCC
CTCGCCGAGC AGACGCCGGA TGCCGTGGTG CTCGACGTGA TGCTGCCGGA CGGCAGCGGC
CTGGAACTGC TCAAGCAACT GCGCGGCGAC CATCCCGACC TGCCGGTGCT GATGCTGTCC
GCCCGCGGCG AGCCGCTGGA CCGCATCCTC GGTCTGGAAC TGGGCGCCGA CGACTACCTG
GCCAAGCCCT GCGACCCGCG CGAACTCACC GCACGGCTGC GCGCCGTGCT GCGGCGAACC
CACCCGGCGC AGCCCAGCGC GCAGATGCAA CTGGGCGACC TGTCGCTGAA CCTGACGCGC
GGCGTGGCGC AGATCGACGG CCAGGAGATC AGCCTGACCC TTTCCGAAAG CCGCATCCTC
GAAGCGCTCC TGCGCCAGCC CGGCGAGCCG CTGGACAAGC AGGCCCTGGC GCAACTGGCG
CTGGGCCGCA AGCTGACCCT CTACGACCGC AGCCTGGACA TGCACGTCAG CAACCTGCGC
AAGAAGCTCG GCAGCCACCC CGACGGCAGC CCGCGCATCC TCGCCCTGCG CGGCCGCGGC
TACTACTACA GCCACTGA
|
|---|
| Protein sequence | MSELLLIDDD RELCELLGTW LVQEGFSVRA SHDGAQARRA LAEQTPDAVV LDVMLPDGSG
LELLKQLRGD HPDLPVLMLS ARGEPLDRIL GLELGADDYL AKPCDPRELT ARLRAVLRRT
HPAQPSAQMQ LGDLSLNLTR GVAQIDGQEI SLTLSESRIL EALLRQPGEP LDKQALAQLA
LGRKLTLYDR SLDMHVSNLR KKLGSHPDGS PRILALRGRG YYYSH
|
|---|
| |