| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_22660 |
|---|
| Symbol | |
|---|
| ID | 4381207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1970616 |
|---|
| End bp | 1971554 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639324381 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789966 |
|---|
| Protein GI | 116051203 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00283529 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCC GAGCCCACCA TGTGTTGATC GGCCTGTTCA GCGTGATCGT GATCGGCGCC
GCCCTGCTCT TCGGCCTGTG GCTGGCCAAG TCCGGCTCGG AGGGCAAGTT CAACTACTAC
GACATCGTCT TCAACGAAGC GGTCAGCGGC CTTTCCCAGG GCAGCTCGGT GCAGTACAGC
GGGATCAAGG TCGGCGACGT GGCCTTCCTC CGCCTCGATC CGAAGGACCC GCGCAAGGTC
TGGGCACGCA TCCGCGTGGT GGCCAGCGCG CCGATCAAGC AGGACACCAC CGCCAAGCTG
GCGCTCACCG GGATCACCGG CACCTCGATC ATCCAGCTCA GCAGCGGCAC GCCCGCCAGC
CCGATGCTGG AGGGCAAGGA CGGGAAGATC CCGGTGATCG TCGCCACGCC CTCGCCGCTG
ACCCAGTTGC TGAGCAACGG CGAAGACCTG ATGGGCAACA TCAACCAGCT CATCGCGCGC
TTCAGCAACC TGCTCTCCGA GGAAAACACA GCGCGCATCA GCCGCACCCT CGACCATCTC
GACCAGGCCA CCGGCGCGCT CTCCGCCGAG CGCGAGAACG TCAGCGCGGT GATGCAGCAG
TTGGCCCAGG CGAGCAGGCA GGCCAACGCC GCGCTGGCCC AGGCCAGCGA GTTGATGCGC
AGCGCCAACG GCCTGCTCAA CGAGCAAGGC AAGGGGATGC TGGAAAACGC CAACAAGACC
ATGGCTTCGC TGGAGCGCAC CAGCGCCACC CTCGACCAGT TGATCAGCGA GAATCGCCAC
TCGCTGGACG GCGGCATCCA GGGACTCGCC GAGCTGGGCC CGGCGGTCAG CGAACTGCGC
GATACCCTGG CGGCACTGCG CGGAATCAGC CGGCGCCTGG AAGAGAACCC GGCGAACTAC
CTGCTGGGCC GGGAAAAAAC CAAGGAGTTC ACCCCATGA
|
|---|
| Protein sequence | METRAHHVLI GLFSVIVIGA ALLFGLWLAK SGSEGKFNYY DIVFNEAVSG LSQGSSVQYS
GIKVGDVAFL RLDPKDPRKV WARIRVVASA PIKQDTTAKL ALTGITGTSI IQLSSGTPAS
PMLEGKDGKI PVIVATPSPL TQLLSNGEDL MGNINQLIAR FSNLLSEENT ARISRTLDHL
DQATGALSAE RENVSAVMQQ LAQASRQANA ALAQASELMR SANGLLNEQG KGMLENANKT
MASLERTSAT LDQLISENRH SLDGGIQGLA ELGPAVSELR DTLAALRGIS RRLEENPANY
LLGREKTKEF TP
|
|---|
| |