Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22640 |
Symbol | |
ID | 4383114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1968939 |
End bp | 1969952 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324379 |
Product | AraC family transcriptional regulator |
Protein accession | YP_789964 |
Protein GI | 116051205 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000896441 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGAAC GTACAACCTT GTCCAGCTGG GTCCAGGGCA TCGTCCTCGC CCTGGAGCTG GAAGGCCTCG ACGGACGCCA GCTGTTCGCC GAGCTGGGCC TCGACTACCA GGCCCTGCAG GACCCCGACG CGCGCTTCCC GCAGGATGCG ATGAGCCGTC TGTGGCAGCG TGCGGTGGCG CTCAGCGGCA ACCCGGCGAT CGCCCTGAAC ATCGCCCGGG TCCGGCGCCC GGCTTTCCAC GTCGTCGGCT ATGCGCTGAT GTCGAGCCGC AACCTGGCGG AAGGCTTCGC GCGCCTGGAA CGCTACCAGC GGATCATCGC GGAAGCCTCC GACCTGACTT TCTGCCGCAC GCCGCAGGGC TATCGACTCG GCGTCACGGT GCATGGTGAT CGCCTGCCGG CGCCGCCGCA GAGTGCCGAA TGCTCGCTGG CCTACCTGGT GGACATGGTC CGCTGGATCA CCGGCCGGCC GCTGGACCCG CTGGCGGTGG AACTGCCCGG CGCGCCCCGC GAGCCGCTGG CACCCTATGC CGAGCTGTTC CGCGCGCCGC TGCGCTTTCA CGCCGAGGAG TTCGCGCTGG TGTTTTCCCG CGTCGACCTC GAGACGCCGC TACCCTCGGC CAACGAGGCG CTGGCCCAGT TGCACGATCG CTTCGCCGGC GAATACCTGG CGCGTTTCAG CACCAGCCGC ATCACCCATC TGGCCCGGCA GACCCTGTGC CGGCTGTTGC CGCAGGGAGA ACCCAAGCGC GAACGGGTGG CCCAGGCACT GCACCTGTCG CAGCGCACCT TGCAACGACG CCTCCAGGAG GAGGGCACCA GCTACCAGCA ACTGCTCGAC GACACACGTC GGGATATGGC CGATCAGTAT CTCCAGCAGC CCGGCCTGAC CTTGCTGGAA GTCGCCTATC TGCTGGGTTT CGCCGATCCG AGCAATTTCT TCCGGGCATT CCGCCGCTGG TTCGGCTGCA CGCCCAACGA ATACCGGGCG CGCCGCCAGG GGCGCCCGGG CTAG
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Protein sequence | MPERTTLSSW VQGIVLALEL EGLDGRQLFA ELGLDYQALQ DPDARFPQDA MSRLWQRAVA LSGNPAIALN IARVRRPAFH VVGYALMSSR NLAEGFARLE RYQRIIAEAS DLTFCRTPQG YRLGVTVHGD RLPAPPQSAE CSLAYLVDMV RWITGRPLDP LAVELPGAPR EPLAPYAELF RAPLRFHAEE FALVFSRVDL ETPLPSANEA LAQLHDRFAG EYLARFSTSR ITHLARQTLC RLLPQGEPKR ERVAQALHLS QRTLQRRLQE EGTSYQQLLD DTRRDMADQY LQQPGLTLLE VAYLLGFADP SNFFRAFRRW FGCTPNEYRA RRQGRPG
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