Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22620 |
Symbol | cyaB |
ID | 4383116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1966871 |
End bp | 1968262 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324377 |
Product | hypothetical protein |
Protein accession | YP_789962 |
Protein GI | 116051207 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.438633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00108909 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGCCTA CCCTCCCCGA CCGCTCGCCG ACGAGCCGGT CCGTCGCGTC CATGCGTGAA TACTATTCGC GCGTGCTGGC CTATATCGCC TGTGGCGCCA GCATCGCGGC GGGAACCTAC ACCCAGTATT TCAGCTACGG CATCCTCTGG ATGGTGCCCT ATGCGCTGCT CTACCCGCAC CTGGCGTACC ACCTCGGCCA GCGCTTCCGC CAGCACGACC CGCGCAAGGT GACCCGCGCC CTGCTCGCGG TCGACGCCGT GCACTGTGGC CTGGGCATGG CGCTGCTCGG CTTCTCCGTG GTGCCCAGCC TGATGTTCCT GCTGGTGCTG AGCTTCACCG CGCTGGTCAT CGGCGGCCTG CGCCTGCTCG GCATGGCCCT GCTGGTATCG GCCAGCAGCG CCCTGCTGGT CGCCGTGCTC GTCGCCCCGC CGCTGCTGGG CAATACCTCG GTCGAGGTGG CCGCGGTCAG CATCCTGTTC TGCGGACTGT ACATCTGCAT CACCGCCTTC TTCGGCCACC AGCAGGGCCT GCGCCTGGCC CAGGTGCGCC AGGAGATCGC CCGCGAGCAG GAAAAGGCCG CGCGGCTCGC GCGCAACCTG GCCAAGTACC TGTCGCCGCA GGTCTGGGAA ATGATCTTCA GCGGCAAGAA GAGCGTGCGC CTGGAAACCC AGCGCAAGAA GCTCACCGTG TTCTTCTCCG ACATCCGCGG CTTCACCGAG CTATCCGAGG AGCTGGAAGC CGAGGCCCTG ACCGACCTGC TCAACAACTA CCTCAACGAG ATGTCGAAGA TCGCCCTCAA GTACGGCGGC ACCATCGACA AGTTCGTCGG CGACTGCGTC ATGGTGTTCT TCGGCGACCC CAGCACCCAG GGCGCGAAGA AGGACGCGGT GGCTGCGGTA TCGATGGGCA TCGCCATGCG CAAGCACATG AAGGTGCTGC GCCAGCAGTG GCGGGCCCAG GGCATCACCA AGCCGCTGGA AATCCGCATG GGCATCAACA CCGGCTATTG CACGGTGGGT AACTTCGGCG CCGACACGCG CATGGACTAC ACCATCATCG GCCGCGAGGT GAACCTCGCC AGCCGCCTGG AAAGCGCCTC GGAAGCCGGC GAAATCCTCA TTTCCCACGA GACCTACTCG CTGATCAAGG ACGTGATCAT GTGCCGCGAC AAGGGCCAGA TCGCGGTCAA GGGCTTCAGC CGCCCGGTGC AGATCTACCA GGTGGTGGAC TCGCGCCGCG ACCTCGGCGC CGCGCCCAGC TACGTCGAGC ACGAATTGCC CGGCTTCTCC ATGTACCTGG ACACCAACAA CATCCAGAAC TACGACAAGG AACGGGTCAT CCAGGCCCTG CAACAGGCCG CCGAGCGCCT ACGCGACAAG GTCATCCTCT GA
|
Protein sequence | MKPTLPDRSP TSRSVASMRE YYSRVLAYIA CGASIAAGTY TQYFSYGILW MVPYALLYPH LAYHLGQRFR QHDPRKVTRA LLAVDAVHCG LGMALLGFSV VPSLMFLLVL SFTALVIGGL RLLGMALLVS ASSALLVAVL VAPPLLGNTS VEVAAVSILF CGLYICITAF FGHQQGLRLA QVRQEIAREQ EKAARLARNL AKYLSPQVWE MIFSGKKSVR LETQRKKLTV FFSDIRGFTE LSEELEAEAL TDLLNNYLNE MSKIALKYGG TIDKFVGDCV MVFFGDPSTQ GAKKDAVAAV SMGIAMRKHM KVLRQQWRAQ GITKPLEIRM GINTGYCTVG NFGADTRMDY TIIGREVNLA SRLESASEAG EILISHETYS LIKDVIMCRD KGQIAVKGFS RPVQIYQVVD SRRDLGAAPS YVEHELPGFS MYLDTNNIQN YDKERVIQAL QQAAERLRDK VIL
|
| |