Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22350 |
Symbol | actP |
ID | 4381215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1945934 |
End bp | 1947589 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324354 |
Product | acetate permease |
Protein accession | YP_789939 |
Protein GI | 116051230 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000000000316225 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGCTC GTCTCCTTGC CGCGCTCGGC CTTGCGGCCT TCGCTCCGGC CCTCTGGGCC GACGCGCTGA CCGGCGACGT GCAGCGCCAG CCGCTGAACG TCTCGGCCAT CGTCATGTTC GTCGCCTTCG TCGGCGCGAC CCTCTGCATC ACCTACTGGG CATCCAAGCG CAACCGCTCG GCGGCCGACT ACTATGCCGC AGGCGGCCGC ATCACCGGCT TCCAGAATGG CCTGGCGATC GCCGGCGACT ACATGTCGGC GGCATCCTTC CTGGGTATTT CGGCGCTGGT CTTCACTTCC GGCTACGACG GCCTGATCTA CTCGATCGGC TTCCTGGTCG GCTGGCCGAT CATCCTCTTC CTCATCGCCG AGCGCCTGCG CAACCTGGGC AAGTACACCT TCGCCGACGT CGCCTCCTAC CGCCTCAAGC AGAAGCAGAT CCGCACCCTG TCGGCCTGCG GCTCGCTGGT GGTGGTGGCG TTCTACCTGA TCGCGCAGAT GGTCGGCGCC GGCAAGCTGA TCGAGCTGCT GTTCGGCCTC AACTACCATG TCGCGGTGGT CCTGGTGGGC ATCCTGATGG TGCTCTACGT GCTGTTCGGC GGCATGCTGG CGACCACCTG GGTGCAGATC ATCAAGGCCG TGCTGTTGCT CTCCGGCGCC TCGTTCATGG CGATCATGGT GCTCAAGCAC GTCAACTTCG ACGTCAGCAC GCTGTTCTCC GAAGCCATCA AGGTGCATCC GAAGGGCGAG GCGATCATGA GTCCGGGCGG CCTGGTCAAG GATCCGATCT CGGCATTCTC CCTGGGCTTC GCGCTGATGT TCGGCACCGC CGGGCTGCCG CACATCCTGA TGCGCTTCTT CACCGTCAGT GACGCCAAGG AAGCGCGCAA GAGCGTGTTC TACGCCACCG GTTTCATCGG CTACTTCTAC ATCCTGACCT TCATCATCGG TTTCGGCGCG ATCCTGCTGG TCAGCACCAA CCCGGACTTC AAGGACGCCA CCGGCGCCCT GATCGGCGGC AACAACATGG CGGCGGTGCA CCTGGCCGAC GCGGTGGGCG GCAGCCTGTT CCTCGGCTTC ATCTCGGCGG TGGCCTTCGC CACCATCCTC GCGGTGGTCG CCGGGCTGAC CCTGGCCGGG GCCTCGGCCG TCTCCCATGA CCTGTACGCC AGCGTGTTCA AGGGCGGCAA GGCCAACGAG AAGGACGAGC TGCGGGTCTC GAAGATGACC ACCGTGGCCC TGGGCGTGGT CGCCATCGTG CTCGGCATCC TCTTCGAGAA GCAGAACATC GCCTTCATGG TCGGCCTGGC CTTCTCCATC GCCGCCAGCT GCAACTTCCC GGTGCTGCTG CTCTCCATGT ACTGGAAGAA GCTGACCACC CGCGGCGCCA TGATCGGCGG CTGGATGGGC CTGATCACCG CGGTGGGCCT GATGGTCCTC GGCCCGACCA TCTGGGTGCA GATCCTCGGC CACGAGAAAG CCATCTACCC GTACGAGTAC CCGGCGCTGT TCTCGATGAT CGTCGCCTTC GTCGGTATCT GGTTCTTCTC CATCACCGAC AAGTCGGCGG CGGCCGACGA GGAGCGGGCG CGCTTCTTCC CGCAGTTCAT CCGTTCCCAG ACCGGCCTGG GCGCCTCTGG CGCGGTGGCC CACTAA
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Protein sequence | MIARLLAALG LAAFAPALWA DALTGDVQRQ PLNVSAIVMF VAFVGATLCI TYWASKRNRS AADYYAAGGR ITGFQNGLAI AGDYMSAASF LGISALVFTS GYDGLIYSIG FLVGWPIILF LIAERLRNLG KYTFADVASY RLKQKQIRTL SACGSLVVVA FYLIAQMVGA GKLIELLFGL NYHVAVVLVG ILMVLYVLFG GMLATTWVQI IKAVLLLSGA SFMAIMVLKH VNFDVSTLFS EAIKVHPKGE AIMSPGGLVK DPISAFSLGF ALMFGTAGLP HILMRFFTVS DAKEARKSVF YATGFIGYFY ILTFIIGFGA ILLVSTNPDF KDATGALIGG NNMAAVHLAD AVGGSLFLGF ISAVAFATIL AVVAGLTLAG ASAVSHDLYA SVFKGGKANE KDELRVSKMT TVALGVVAIV LGILFEKQNI AFMVGLAFSI AASCNFPVLL LSMYWKKLTT RGAMIGGWMG LITAVGLMVL GPTIWVQILG HEKAIYPYEY PALFSMIVAF VGIWFFSITD KSAAADEERA RFFPQFIRSQ TGLGASGAVA H
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