Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20890 |
Symbol | rfaD |
ID | 4384596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1800156 |
End bp | 1801154 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324228 |
Product | ADP-L-glycero-D-mannoheptose 6-epimerase |
Protein accession | YP_789815 |
Protein GI | 116051352 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCATGA GCATCATCGT CACCGGCGCC GCCGGCTTCA TCGGCAGCAA TCTGCTGCAG GCGCTGAACC GGCGCGGCGA GACCGACATC ATCGCGGTGG ACGATCTCAC CGACGGCGAG CAGTTCCGCA ACCTGGCGGA CGCCGATATC GCCGACTACC TGGACCAGAA CGACTTCCTC GAGCGTTACG CCCGCGGCGA CTTCGGCACG GTCCGCGCGC TGTTCCACCA GGGTGCCTGC GCCAGCACCC TGGAAAGCAA TGGCCGCTAC ATGATGGAGA ACAACTACCG CTACAGTTGC CGCCTGCTGG AAAGCAGCCT GGAACTCGGC GTGCCGTTCC TCTACGCCTC GTCGGCGGCG GTCTACGGAG CCGGCCGGAC CTTCCGCGAG GCGCGCCAGT ACGAGCGGCC GCTGAACGTC TACGGCTATT CCAAGTTCCT CTTCGACCAG CGTGTGCGGC GGGCGCTGCC GCAGGCGCGC AGCCAGGTGG TCGGCCTGCG TTACTTCAAC GTCTACGGGC CGCGCGAGGA ACACAAGGGG CGGATGGCCT CGGTGGCCTA CCACTGCTAC CAGCAATTGC GCCGCGACGG GCGGGTCGAA CTGTTCGGCG AACACGGTGG CTTCCCGCCC GGCGGCCACC TGCGCGACTT TGTCGCGGTG GAGGACGTGG CGCGGGTCAA CCTGCATTTC TTCGATCATC CGCAGCGTTC GGGAATCTTC AACCTCGGCA GCGGCCAGGC GCGGACCTTC AACGAGGTCG CCCTGGCGGT GATCAATAGC GTCCGCGCCA ATGCCGACCA GCCGCCCCTG TCGCTGCAGC AGGCGGTGGA AAGCGGCCTG CTCGGCTACC GCGAGTTCCC CGAGTCGCTG CGGGCGCGCT ACCAGAGCCA CACCTGCGCC GACCTGGAGC TGCTGCGCGA GGCGGGCTAC CGCGACGATT TCCAGAGCCT GGAAGAGGGC GTCGCCGGCT ACTGCCGCTG GCTGGCGCGC AGCGCCTGA
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Protein sequence | MPMSIIVTGA AGFIGSNLLQ ALNRRGETDI IAVDDLTDGE QFRNLADADI ADYLDQNDFL ERYARGDFGT VRALFHQGAC ASTLESNGRY MMENNYRYSC RLLESSLELG VPFLYASSAA VYGAGRTFRE ARQYERPLNV YGYSKFLFDQ RVRRALPQAR SQVVGLRYFN VYGPREEHKG RMASVAYHCY QQLRRDGRVE LFGEHGGFPP GGHLRDFVAV EDVARVNLHF FDHPQRSGIF NLGSGQARTF NEVALAVINS VRANADQPPL SLQQAVESGL LGYREFPESL RARYQSHTCA DLELLREAGY RDDFQSLEEG VAGYCRWLAR SA
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