Gene PA14_20870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20870 
Symbol 
ID4384598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1797521 
End bp1799707 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content67% 
IMG OID639324226 
Producthypothetical protein 
Protein accessionYP_789813 
Protein GI116051354 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.817283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCC TGCTGCTCGT ACTGCTGCTC CTGCTTCCCC TGTCCGCCCT CGCCACGGAG 
GCCCGGCCGA AGATCGGCCT GGTCCTCTCC GGAGGTGCCG CCCGTGGCCT GGCCCATATC
GGCGTGCTCA AGGCCCTCGA CGAACAGGGC ATCCAGATCG ACGCCATCGC CGGCACCAGC
ATGGGCGCGG TGGTCGGCGG CCTGTACGCC TCCGGCTACA CCCCCGCCGA ACTGGAGCGC
ATCGCCCTGG AGATGGACTG GCAGCAGGCG CTGTCCGACG CGCCGCCGCG CAAGGACGTG
CCGTTCCGGC GCAAGCAGGA CGACCGCGAC TTCCTGGTCA AGCAGAAGAT CAGCTTCCGC
GACGACGGCA CCCTCGGCCT GCCGCTGGGG GTGATCCAGG GCCAGAACCT GGCGATGGTG
CTGGAAAGCC TGCTGGTGCA CACCAGCGAC AACCGCGACT TCGACAAGCT GGCGATCCCC
TTCCGCGCCG TCTCCACCGA TATCGCAACC GGCGAGAAAG TGGTGTTCCG CAAGGGCCAC
CTGCCCCAGG CGATCCGCGC CAGCATGTCG ATCCCCGCCG TGTTCGCCCC GGTGGAGATC
GACGGCAGGC TGCTGGTGGA TGGCGGCATG GTCGACAACA TCCCGGTGGA CGTGGCGCGC
GACATGGGCG TGGACGTGGT GATCGTGGTC GACATCGGCA ACCCGCTGCG CGACCGCAAG
GACCTGAGCA CCGTGCTCGA CGTGATGAAC CAGTCGATCA CCCTGATGAC CCGGAAGAAC
TCCGAAGCCC AGCTGGCCAC GCTCAAGCCC GGCGACGTGC TGATCCAGCC GCCGCTGTCC
GGCTACGGCA CCACCGACTT CGGCCGCGTG CCGCAACTGA TCGACGCCGG CTACCGCGCC
ACCACGGTGC TCGCCGCGCG CCTCGCCGAG TTGCGCAAGC CGAAGGACCT CAACAGCGAA
GCGCTCGACG TGGCGCGCAC GCCGAACCAG CGCAAGCCGG TGATCGACGC GATCCGCGTG
GAGAACAACT CGAAGGTCAG CGACGAGGTG ATCCGCCACT ACATCCGCCA GCCGCTCGGC
ACGCGCCTCG ACCTCGGCCG CCTGCAGGAC GACATGAGCA CCCTCTACGG CCTCGACTAC
TTCGACCAGG TGCAGTACCG GGTGGTCAAG GAGAAGAAGC TCAACACCCT GGTGATCCAC
GCCACCGGCA AGAAAGGCGG CACCGACTTC CTTCGCCTGG GCCTCAACCT GTCCGACGAC
ATGCGCGGCG AAAGCACCTT CAACCTCGGC GGCAGCTACC GCATGAACGG CCTCAACCGG
CTCGGCGCCG AGTGGCTGAC CCGGGTCCAG CTCGGCGACC GCCAGGAACT CTACAGCGAG
TTCTACCAGC CGCTCGACGT CGGCTCACGC TACTTCGTCG CGCCCTTCCT GTTCCACGAG
GCACAGAACG TCGACGTCAC CGAGAACAAC GACCCGCTGC TGCGCTATCG CCTGGAGCGC
TACGGCTACG GCCTCAACGT CGGCCGGCAG ATCGCCAACA ACGGCGAAAT CCGCCTGGGC
GCGGTGCAGG CCTACGGCAA GGCCGACGTA CGCATCGGCG ACCCGAGCCT GCCGGACATC
GACTTCACCG AGGGCTACTA CGAACTGAAG TACTCGTTCG ACACCGTCGA CGACGTCAAT
TTCCCCCACG AGGGCGAGGA GATCGGCCTG ACCATGCGCC GCTACGACAA GTCCCTCGGC
TCGGACGACA GCTACCGGCA GTGGGACCTG CGGCTGAACA AGGCGCTCAG CTTCGGCGCC
GACACCTGGG TGTTCGGCGG CGGCTACGGG CGCACCCTGG ACGACGCCGA GGTGGTCACC
TCCAGCTTCA CCCTCGGCGG CGCCCGCGAG CTGTCGGGCT TCCGCCGCGA TGCGCTGTCC
GGGCAGAACT ACAGCCTGGG GCGGATCGTC TATTACCGGC GCCTCACCGA ACGTTCCTTC
CTGCCGCTGG ACTTCCCGCT GTACCTGGGC GGCAGCATCG AGCGCGGACG CATCTGGAAC
AACGACAACG AATACGACAG CGGCTACATC AACGCCGCCA GCCTGATGAT CGGCTTCGAT
ACGCCGCTGG GGCCGCTGAC CTTCAGCTAC GGGATCAACG ACGAGAACTT CAAGGCGTTC
TACCTGAACC TCGGGCAGAA CTTCTGA
 
Protein sequence
MRRLLLVLLL LLPLSALATE ARPKIGLVLS GGAARGLAHI GVLKALDEQG IQIDAIAGTS 
MGAVVGGLYA SGYTPAELER IALEMDWQQA LSDAPPRKDV PFRRKQDDRD FLVKQKISFR
DDGTLGLPLG VIQGQNLAMV LESLLVHTSD NRDFDKLAIP FRAVSTDIAT GEKVVFRKGH
LPQAIRASMS IPAVFAPVEI DGRLLVDGGM VDNIPVDVAR DMGVDVVIVV DIGNPLRDRK
DLSTVLDVMN QSITLMTRKN SEAQLATLKP GDVLIQPPLS GYGTTDFGRV PQLIDAGYRA
TTVLAARLAE LRKPKDLNSE ALDVARTPNQ RKPVIDAIRV ENNSKVSDEV IRHYIRQPLG
TRLDLGRLQD DMSTLYGLDY FDQVQYRVVK EKKLNTLVIH ATGKKGGTDF LRLGLNLSDD
MRGESTFNLG GSYRMNGLNR LGAEWLTRVQ LGDRQELYSE FYQPLDVGSR YFVAPFLFHE
AQNVDVTENN DPLLRYRLER YGYGLNVGRQ IANNGEIRLG AVQAYGKADV RIGDPSLPDI
DFTEGYYELK YSFDTVDDVN FPHEGEEIGL TMRRYDKSLG SDDSYRQWDL RLNKALSFGA
DTWVFGGGYG RTLDDAEVVT SSFTLGGARE LSGFRRDALS GQNYSLGRIV YYRRLTERSF
LPLDFPLYLG GSIERGRIWN NDNEYDSGYI NAASLMIGFD TPLGPLTFSY GINDENFKAF
YLNLGQNF