Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_20870 |
Symbol | |
ID | 4384598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1797521 |
End bp | 1799707 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324226 |
Product | hypothetical protein |
Protein accession | YP_789813 |
Protein GI | 116051354 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.817283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCC TGCTGCTCGT ACTGCTGCTC CTGCTTCCCC TGTCCGCCCT CGCCACGGAG GCCCGGCCGA AGATCGGCCT GGTCCTCTCC GGAGGTGCCG CCCGTGGCCT GGCCCATATC GGCGTGCTCA AGGCCCTCGA CGAACAGGGC ATCCAGATCG ACGCCATCGC CGGCACCAGC ATGGGCGCGG TGGTCGGCGG CCTGTACGCC TCCGGCTACA CCCCCGCCGA ACTGGAGCGC ATCGCCCTGG AGATGGACTG GCAGCAGGCG CTGTCCGACG CGCCGCCGCG CAAGGACGTG CCGTTCCGGC GCAAGCAGGA CGACCGCGAC TTCCTGGTCA AGCAGAAGAT CAGCTTCCGC GACGACGGCA CCCTCGGCCT GCCGCTGGGG GTGATCCAGG GCCAGAACCT GGCGATGGTG CTGGAAAGCC TGCTGGTGCA CACCAGCGAC AACCGCGACT TCGACAAGCT GGCGATCCCC TTCCGCGCCG TCTCCACCGA TATCGCAACC GGCGAGAAAG TGGTGTTCCG CAAGGGCCAC CTGCCCCAGG CGATCCGCGC CAGCATGTCG ATCCCCGCCG TGTTCGCCCC GGTGGAGATC GACGGCAGGC TGCTGGTGGA TGGCGGCATG GTCGACAACA TCCCGGTGGA CGTGGCGCGC GACATGGGCG TGGACGTGGT GATCGTGGTC GACATCGGCA ACCCGCTGCG CGACCGCAAG GACCTGAGCA CCGTGCTCGA CGTGATGAAC CAGTCGATCA CCCTGATGAC CCGGAAGAAC TCCGAAGCCC AGCTGGCCAC GCTCAAGCCC GGCGACGTGC TGATCCAGCC GCCGCTGTCC GGCTACGGCA CCACCGACTT CGGCCGCGTG CCGCAACTGA TCGACGCCGG CTACCGCGCC ACCACGGTGC TCGCCGCGCG CCTCGCCGAG TTGCGCAAGC CGAAGGACCT CAACAGCGAA GCGCTCGACG TGGCGCGCAC GCCGAACCAG CGCAAGCCGG TGATCGACGC GATCCGCGTG GAGAACAACT CGAAGGTCAG CGACGAGGTG ATCCGCCACT ACATCCGCCA GCCGCTCGGC ACGCGCCTCG ACCTCGGCCG CCTGCAGGAC GACATGAGCA CCCTCTACGG CCTCGACTAC TTCGACCAGG TGCAGTACCG GGTGGTCAAG GAGAAGAAGC TCAACACCCT GGTGATCCAC GCCACCGGCA AGAAAGGCGG CACCGACTTC CTTCGCCTGG GCCTCAACCT GTCCGACGAC ATGCGCGGCG AAAGCACCTT CAACCTCGGC GGCAGCTACC GCATGAACGG CCTCAACCGG CTCGGCGCCG AGTGGCTGAC CCGGGTCCAG CTCGGCGACC GCCAGGAACT CTACAGCGAG TTCTACCAGC CGCTCGACGT CGGCTCACGC TACTTCGTCG CGCCCTTCCT GTTCCACGAG GCACAGAACG TCGACGTCAC CGAGAACAAC GACCCGCTGC TGCGCTATCG CCTGGAGCGC TACGGCTACG GCCTCAACGT CGGCCGGCAG ATCGCCAACA ACGGCGAAAT CCGCCTGGGC GCGGTGCAGG CCTACGGCAA GGCCGACGTA CGCATCGGCG ACCCGAGCCT GCCGGACATC GACTTCACCG AGGGCTACTA CGAACTGAAG TACTCGTTCG ACACCGTCGA CGACGTCAAT TTCCCCCACG AGGGCGAGGA GATCGGCCTG ACCATGCGCC GCTACGACAA GTCCCTCGGC TCGGACGACA GCTACCGGCA GTGGGACCTG CGGCTGAACA AGGCGCTCAG CTTCGGCGCC GACACCTGGG TGTTCGGCGG CGGCTACGGG CGCACCCTGG ACGACGCCGA GGTGGTCACC TCCAGCTTCA CCCTCGGCGG CGCCCGCGAG CTGTCGGGCT TCCGCCGCGA TGCGCTGTCC GGGCAGAACT ACAGCCTGGG GCGGATCGTC TATTACCGGC GCCTCACCGA ACGTTCCTTC CTGCCGCTGG ACTTCCCGCT GTACCTGGGC GGCAGCATCG AGCGCGGACG CATCTGGAAC AACGACAACG AATACGACAG CGGCTACATC AACGCCGCCA GCCTGATGAT CGGCTTCGAT ACGCCGCTGG GGCCGCTGAC CTTCAGCTAC GGGATCAACG ACGAGAACTT CAAGGCGTTC TACCTGAACC TCGGGCAGAA CTTCTGA
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Protein sequence | MRRLLLVLLL LLPLSALATE ARPKIGLVLS GGAARGLAHI GVLKALDEQG IQIDAIAGTS MGAVVGGLYA SGYTPAELER IALEMDWQQA LSDAPPRKDV PFRRKQDDRD FLVKQKISFR DDGTLGLPLG VIQGQNLAMV LESLLVHTSD NRDFDKLAIP FRAVSTDIAT GEKVVFRKGH LPQAIRASMS IPAVFAPVEI DGRLLVDGGM VDNIPVDVAR DMGVDVVIVV DIGNPLRDRK DLSTVLDVMN QSITLMTRKN SEAQLATLKP GDVLIQPPLS GYGTTDFGRV PQLIDAGYRA TTVLAARLAE LRKPKDLNSE ALDVARTPNQ RKPVIDAIRV ENNSKVSDEV IRHYIRQPLG TRLDLGRLQD DMSTLYGLDY FDQVQYRVVK EKKLNTLVIH ATGKKGGTDF LRLGLNLSDD MRGESTFNLG GSYRMNGLNR LGAEWLTRVQ LGDRQELYSE FYQPLDVGSR YFVAPFLFHE AQNVDVTENN DPLLRYRLER YGYGLNVGRQ IANNGEIRLG AVQAYGKADV RIGDPSLPDI DFTEGYYELK YSFDTVDDVN FPHEGEEIGL TMRRYDKSLG SDDSYRQWDL RLNKALSFGA DTWVFGGGYG RTLDDAEVVT SSFTLGGARE LSGFRRDALS GQNYSLGRIV YYRRLTERSF LPLDFPLYLG GSIERGRIWN NDNEYDSGYI NAASLMIGFD TPLGPLTFSY GINDENFKAF YLNLGQNF
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