Gene PA14_20130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20130 
Symbol 
ID4381362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1734730 
End bp1735656 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID639324163 
ProductLysR family transcriptional regulator 
Protein accessionYP_789751 
Protein GI116051416 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA CCCTCCGCCA GCTCGAGGTG TTCGTCGCCG TGGCCCAGCA GGAGAGCGTC 
TCCCGTGCCG CCGAGGGGCT GTCGCTGTCG CAGTCGGCGA CCAGCACCTC GCTCGGCGAG
CTGGAGCGGC AGTTCGACTG CAAGCTGTTC GACCGCGCCG GCAAGCGCCT GACCCTCAAT
GCCCTCGGCC GCCAACTGCT GCCGCAGGCG GTGGCGCTGC TCGACCGCGG CGAGGAAATC
GAGAACCTGC TCAACGGCAA GACCGCCTTC GGCTCCCTCG ACCTCGGCGC CACCCTGACC
ATCGGCAACT ACCTGGCCAC GCTGCTGATC GGCGCCTTCA TGCAGCGCCA GCCGGACTGC
CGGGTGCGCC TGCACGTGCA CAACACCGCC CAGGTGGTGC AGCAGGTCGC CCACTACGAG
CTGGACCTGG GCCTGATCGA GGGCGACTGC CGGCATCCGG ACATCGAGGT GCAACCCTGG
ATGGAGGACG AACTGGTGGT GTTCTGCGCC CCCCAGCATC CGCTGGCGCG GCGGGGCGGC
GCCGATCTGG AACGGCTGAC GCGGGAGGCC TGGATCCTCC GCGAGCAGGG CTCCGGCACC
CGCCTGACCT TCGACCAGGC CATGCGTCAT CACCCGCGGC CGCTGAACAT CCGCCTGGAG
CTGGAGCACA CCGAGGCGAT CAAGCGTGCC GTGGAGTCCG GCCTGGGCAT CGGCTGCATT
TCCCGCCTGG CCCTGCGCGA CGCTTTCCGC CGCGGCAGCC TGGTGCCGGT GGAAACGCCC
GGCCTGGACC TGCGCCGGCA GTTCTACTTC ATCTGGCACA AGCAGAAGTA CCAGACCGCG
ACCATGCGCG AGTTCCTCGA CCTGTGCCGC AGCGAGACCG CCGGGATCAG CCGCAGCGAC
GAGATCGTGC TGCCGCTGAT TCCCTGA
 
Protein sequence
MKFTLRQLEV FVAVAQQESV SRAAEGLSLS QSATSTSLGE LERQFDCKLF DRAGKRLTLN 
ALGRQLLPQA VALLDRGEEI ENLLNGKTAF GSLDLGATLT IGNYLATLLI GAFMQRQPDC
RVRLHVHNTA QVVQQVAHYE LDLGLIEGDC RHPDIEVQPW MEDELVVFCA PQHPLARRGG
ADLERLTREA WILREQGSGT RLTFDQAMRH HPRPLNIRLE LEHTEAIKRA VESGLGIGCI
SRLALRDAFR RGSLVPVETP GLDLRRQFYF IWHKQKYQTA TMREFLDLCR SETAGISRSD
EIVLPLIP