Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_18930 |
Symbol | |
ID | 4381473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1633210 |
End bp | 1633776 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639324069 |
Product | electron transport complex protein RnfB |
Protein accession | YP_789657 |
Protein GI | 116051507 |
COG category | [C] Energy production and conversion |
COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000143693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.123767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGGCG TGTTCCTGGC GATCGGCGCG CTGCTGCCGA TCTGCCTGGC CGGCGGTGCG CTGCTCGGCT ATGCGGCGGT GCGCTTCCGC GTCCAGGGCG ACCCGGTCGC CGAGCAGGTC AACGCCCTGT TGCCGCAGAC CCAGTGCGGC CAGTGTGGCT ACCCCGGCTG CAAGCCCTAC GCCGAGGCGA TCGCCGCCGG CGACAAGATC AACAAGTGCC CGCCGGGCGG CGAAGCGACC ATCCGCGCCC TCGCCGACCT GCTCGACCTG GAGCCCGAGC CGCTCGACGC CGCCGAGGAA ACCCCGCCGC GGGTAGCCTA CATCCGCGAG GCCGAATGCA TCGGCTGCAC CAAGTGCATC CAGGCCTGCC CGGTGGACGC CATCGTCGGC GCCGCACGGC TGATGCACAC GGTGATCGCC GACGAATGCA CCGGTTGCGA CCTGTGCCTG GAGCCCTGTC CGGTGGACTG CATCGAGATG CGCGAAACCC CAGACGACGT GCGCCACTGG AAATGGCCGC AGCCGTCGCC GCGACTGATC GCCAGCGACC GGGAGCGAGC GGCATGA
|
Protein sequence | MNGVFLAIGA LLPICLAGGA LLGYAAVRFR VQGDPVAEQV NALLPQTQCG QCGYPGCKPY AEAIAAGDKI NKCPPGGEAT IRALADLLDL EPEPLDAAEE TPPRVAYIRE AECIGCTKCI QACPVDAIVG AARLMHTVIA DECTGCDLCL EPCPVDCIEM RETPDDVRHW KWPQPSPRLI ASDRERAA
|
| |