Gene PA14_18880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18880 
Symbolnth 
ID4381478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand- 
Start bp1627864 
End bp1628502 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID639324064 
Productendonuclease III 
Protein accessionYP_789652 
Protein GI116051512 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00491393 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0304533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCG CCAAGCGCGC GGAGATCTTC CGCCGACTGC ACGAAGACAA CCCCGAGCCA 
AGGACCGAAC TGGCCTACAC CACCCCCTTC GAACTGCTCA TCGCGGTGAT CCTCTCCGCC 
CAGGCCACCG ACGTCGGGGT GAACAAGGCC ACCGCCCGCC TCTATCCGGT GGCCAACACC 
CCCGAGGCGA TCCACGCCCT CGGCGTCGAG GGGCTGTCGG AGTACATCAA GACCATCGGC 
CTCTACAACA GCAAGGCGAA GAACGTCATC GAAACCTGCC GCATCCTCAT CGAAAAGCAC 
GGCGGCCAGG TCCCCGACAA CCGCGAGGAC CTCGAAGCCC TCCCCGGGGT TGGCCGCAAG 
ACCGCCAACG TGGTGCTCAA TACCGCCTTC CGGCAACTGG CCATGGCGGT GGACACGCAT 
ATCTTCCGCG TCGCCAACCG CACCGGCATA GCACCGGGAA AGAACGTTCT GGAAGTGGAG 
AAGAAACTGC TGAAGTTCGT GCCGCGCGAG TACCTGCTCG ATGCCCACCA CTGGCTGATC 
CTGCATGGCC GCTACGTCTG CAAGGCGCGC AAGCCGCAAT GCGGAAGCTG TCGGATCGAG 
GACCTGTGCG AATACAAGCA CAAGACTTCA GACGATTGA
 
Protein sequence
MNAAKRAEIF RRLHEDNPEP RTELAYTTPF ELLIAVILSA QATDVGVNKA TARLYPVANT 
PEAIHALGVE GLSEYIKTIG LYNSKAKNVI ETCRILIEKH GGQVPDNRED LEALPGVGRK 
TANVVLNTAF RQLAMAVDTH IFRVANRTGI APGKNVLEVE KKLLKFVPRE YLLDAHHWLI 
LHGRYVCKAR KPQCGSCRIE DLCEYKHKTS DD