| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18790 |
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| Symbol | |
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| ID | 4381486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1618641 |
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| End bp | 1620116 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639324056 |
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| Product | putative outer membrane efflux protein |
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| Protein accession | YP_789644 |
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| Protein GI | 116051520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0851472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT ACCTGCGGTC TTCGTTGAGC GCGCTGATCC TGCTGGGCGG CTGTGCCGCG
GTGGGGCCCG ACTATGCGCC GCCGAGCGCG TCCGCACCGG CCAGCTTCGG CGCGATGCCG
GCGGGTATCG ATGGCAGTGG CGTGGAGATC GAGTGGTGGC GCGGGTTCGA CGAGCCAGCC
CTGGAGTCTC TGATCCAGCG GGCGCTCGCG GCGAACCTCG ACATCGCCCT TGCCGGCGCG
CGCCTGGACG AAGCGAAGGC GCTGCTGCGC GAGAACCGCG AGGAGTTCCT GCCGCGCGGC
GGGCCGGCGT TCGATTACCA GGCCCGGCGG CGCGGCGAGG TGGAAACACC GGCCGGCCAG
CAGCGCGACA TCGAGACCTA TCGCGGCGCG CTGGATGCTT CCTGGGAAAT CGACCTGTTC
GGCCGGGTGC GGCGCTCGGT GGAGGCCGCC GAGGCGCAGG CGGGTTCGCG CGAGGCCCTG
CTGCGCAACG TGCAGGCGAG CGTCGCGGCT ACGGTTGCCA TGACCTGGTT CCAGCTACTG
GGCATCGAGG CCGAACTTGC GGTGGTCCAT GACATCGCCG GCAACCAGCG CGACAGCCTG
GAGATGGTCG AGCGCCTGGT CAGCGCCGGC TCCGCCCACG AGTTCGACCG GTTGCGCGCC
GAAGCGTTAT TGCACAACGT CGAGGCGGCC GTGCCCGACC TCGAACGGCG CCGCGCCGCC
ACCCGCAATG CGCTGGCCGT TCTCCTCGCG GAAGCCCCGC AGGCCTTCAG CCCGCCGGTC
GCCCGCGCCT CCGGGGAAAG GCTGACGCTC CGCACCCTCG GGGTCGGCGA CCCGGCGGGA
CTGCTGGCGC GTCGCGCCGA CATCGCCGCG GCCGAACGCA ACCTGGCGGC CGCGACCGCA
CGTATCGGCG TCGAGACCGC GGGGCTGTAT CCGCAGGTCG AGGTACGCGG CTCGATCGGC
CTGGTCGCCG GCAATCTCGA TGCTTTGGAC GAGAGTGGTA CGTCCTTCAA CGTCCTGAAC
CCGGTGATTC GCTGGGCGTT ACTCGACCGC GGTCGCGTGC GGGCGCGGAT CGCCGCCAGC
GAAGCCCGTG CGCAGGAGGC ATTGATCCTC TACGACCGGA CGGTACTGCG CGCCCTGCAG
GAGACCGATG ATGCCTTCAA CGGCTATGGC GCTGCCGCTG ACAGGCTCCG CCTGCGCCTG
CTCGAGGCGA CGGCCAATCG CGAGGCGGCG CGCCTGGCCC GGGAACGCTT CGTCCAGGGG
GACGGCGAGT ACCTGGACGT GCTCGAGGCG GAACGCTCGG ACTACCTCAG CCGGCGCGCA
TTGAGCATCG CGCGCACCGA GCAGCGCCTT GCCGTCGTGG GTATCTACAA GGCGCTGGGG
GGTGGCTGGG AGGCCTGCGC GGGGGCGCGG CGCTGTGGCG TGGCTACCGA CGATACCTCT
CCAGGCGTGG CACGGCAGCG CGACAGTCGC TCCTGA
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| Protein sequence | MKPYLRSSLS ALILLGGCAA VGPDYAPPSA SAPASFGAMP AGIDGSGVEI EWWRGFDEPA
LESLIQRALA ANLDIALAGA RLDEAKALLR ENREEFLPRG GPAFDYQARR RGEVETPAGQ
QRDIETYRGA LDASWEIDLF GRVRRSVEAA EAQAGSREAL LRNVQASVAA TVAMTWFQLL
GIEAELAVVH DIAGNQRDSL EMVERLVSAG SAHEFDRLRA EALLHNVEAA VPDLERRRAA
TRNALAVLLA EAPQAFSPPV ARASGERLTL RTLGVGDPAG LLARRADIAA AERNLAAATA
RIGVETAGLY PQVEVRGSIG LVAGNLDALD ESGTSFNVLN PVIRWALLDR GRVRARIAAS
EARAQEALIL YDRTVLRALQ ETDDAFNGYG AAADRLRLRL LEATANREAA RLARERFVQG
DGEYLDVLEA ERSDYLSRRA LSIARTEQRL AVVGIYKALG GGWEACAGAR RCGVATDDTS
PGVARQRDSR S
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