Gene PA14_18720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18720 
Symbol 
ID4381491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1611174 
End bp1612139 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID639324051 
ProductOmpA family membrane protein 
Protein accessionYP_789639 
Protein GI116051525 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.746177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.130207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCCGC GCCTTCTTCT ATTGCCTTTC CTGCTCAGCA GCCTGCCGGC ACTGGCGGTG 
ACCTTCCAGA CGCGGCTGGA GAGCGTCGAG TGGAAGGTCG AAGGCGACCA GTTCGAATGC
CGCCTGTCGC AGCCGGTGGC GAATTTCGGG GTCGGCGAGT TCGTCCGGCG TGCCGGCGAG
CAGGCGACCT TCCGCCTGAA GCCCGAGGCC CAGTGGCTGG GGCGCGGGTC GGCGACCCTG
CTGGCTGCCG CGCCGCCCTG GCGACCGGGA CAGGGCGACA TCAACCTTGG CCAGGTCAGC
ATCGGCAGCG GCGAGGTGCC GTTCAACAGC AGCCAGCAAC AGGCCGGTCG GTTGCTCACC
GGCCTGCTCG AGGGGCGCAG CCCGCTGGTC CGCCATCGCA CCTGGCAGGG CGATCGCCTG
GAGGTGCGCC TGCTGCCGGC GCGCTTCGCC AGCGTCTACA GCCAGTACCA GGCCTGCATC
GCCAAGCTGC TGCCGGTGAA CTTCGAGCAG GTCAAGCTGG CCCAGGTCGG CTTCCCCGAC
GGCGGCACGG CGCTGAACGA CGTGGCGCGA GCCAAGCTGG ACATCATCCT GCAACTGCTC
AAGGCCGATC CGAGCATCAA CCGGATCGAA CTCGACGGGC ACTCCGACAA CAGCGGCAAC
CGCCTGACCA ACCGCGACCT GTCGCGCCGC CGCGCGCTGG CGGTGCAGGA GTACCTGAAG
AGCAACGGGG TGCCGGAAAG CCAGATCAAC GTGCGCTTCT ACGGCGAGCG CTACCCGCTG
GTGGCCAACA ACAGCGCCGC CAACCGTGCG CGCAACCGCC GGGTCACCGT GCACCTGTCG
CGCGAGGCGG TGGTCGAGCC GGCGACGGAA GCGCCGAAGG CCGAGGACAA GCCGGCGCCG
CCCGCGGCAG AACCTGCCGC ACCGAAGCCT CCGGCCGCCT CGCTTCAGGG AAAACCCACG
GTTTGA
 
Protein sequence
MQPRLLLLPF LLSSLPALAV TFQTRLESVE WKVEGDQFEC RLSQPVANFG VGEFVRRAGE 
QATFRLKPEA QWLGRGSATL LAAAPPWRPG QGDINLGQVS IGSGEVPFNS SQQQAGRLLT
GLLEGRSPLV RHRTWQGDRL EVRLLPARFA SVYSQYQACI AKLLPVNFEQ VKLAQVGFPD
GGTALNDVAR AKLDIILQLL KADPSINRIE LDGHSDNSGN RLTNRDLSRR RALAVQEYLK
SNGVPESQIN VRFYGERYPL VANNSAANRA RNRRVTVHLS REAVVEPATE APKAEDKPAP
PAAEPAAPKP PAASLQGKPT V