Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_18630 |
Symbol | |
ID | 4381500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1600241 |
End bp | 1603228 |
Gene Length | 2988 bp |
Protein Length | 995 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639324042 |
Product | putative serine protease |
Protein accession | YP_789630 |
Protein GI | 116051534 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.169589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACCACTCCTT CCGCCCTCGC CCCACCTCGT TGTCAGCCGC CCTGCTGCTG GGCGCCTGGA TCGCCCAGCC GGCCACGGCC GCCTATGTCG AAGCCGGTCG GCCCGGCGAT CCGGCCAGTT GGCGCTCCGC CGAATACCAG CAGGACTGGG GCCTGGAACG GATGCGGGCC GACCAGGCCT ATGCCGCCGG CATCGACGGC CAGGGCGTGA AGATCGGCGA GATGGACTCC GGTTTCGACC CGAGCCATCC GGATACCCCC GCCTCGCGCT ACCAGCCGGT GACGGCCAGC GGCACCTATG TCGACGGCAC GCCGTTCAGC GTCAGCGGCG CGATGAACGG CAACAACGAC TCCCACGGCA CCCACGTCGG CGGCACCCTC GGTGCCTCGC GCGACGGCGT CGGCATGCAC GGGGTGGCCT ACGCGGCACA GGTGTACGTC GCCAACACCA ACCAGAACGA CAGCTTCCTG TTCGGCCCGA CGCCCGACCC GAACTATTTC AAGGCCGCCT ACCAGGCGCT GGCCGACGCC GGGGTGCGGG CGATCAACAA CAGTTGGGGC AGCCAGCCCA AGGACGTCAG CTACGAGACC CTCGACGGCC TGCACGCCGC CTATGCCCAG CACTACGGGC GCTCCACCTG GCTGGACGCC GCCGCCGGCG TCTCCCGCCA GGGCGTGATC AACGTCTTCA GCGCCGGCAA CAGCGGCTAC GCCAACGCCA GCGTGCGCTC CGCCCTGCCC TACTTCCAGC CGGACCTGGA AGGCCACTGG CTGGCCGTGT CCGGCCTCGA CCAGCAGAAC GGCCAGCGCT ACAACCGCTG CGGCATCGCC AAGTACTGGT GCATCACCAC GCCCGGCCGC CTGATCAACA GCACCATGCC CGGCGGCGGC TACGCCAACA AGTCCGGTAC CTCGATGGCC GCGCCCCACG CCACCGGCGC GCTGGCCCTG GTCATGCAGC GCTATCCGTA CCTGAACAAC GAGCAGGCGC TGCAGGTTCT GCTGACCACC GCCACCCAGC TCGACGGCAC GCCGACCGGC GCCCCCACCG ACACCGTCGG CTGGGGCGTG CCGGATCTCG GTCGGGCGAT GCATGGGCCT GGACAATTGC TCGGCCGCTT CGAGGCCAAC CTCCCGGCCG GCCTGCGCGA CGAATGGAGC AACCCGATTT CCGATAGCGC CCTGCTCCAG CGCCAGGCCG AGGACGCCGC CGAGCACGCG GCCTGGCAGC GGACGCTGAA GGACAAGGGC TGGGAAAACG GCTTGCCAGC CGGCGCCAGC CAGCAGGAAC GCACCGACTA TGCCATCGGC ATGGCCCGCG ACCAGGCCGC CGCCCAGCGC CAGTACCAGG GCAGCCTGGT CAAGGCCGGT GCCGGCAGCC TGGTCCTGAG CGGCGACAGC ACCTATCGCG GGCCGACCCT GGTCGATGGC GGGCTGCTCA GCGTCGACGG TTCGCTGCTG TCCGCCGTCG AAGTCAATGC CGGCGGCACC CTCGGCGGCA GCGGCAGGAT CGGCGGCCTG CTGGCGCGCT CCGGCGGCAC GGTGGCCGCG GGCAACTCCA TCGGCACCCT GGAGGTCGCC GGGGACCTGC GCTTCGAATC CGGCTCGACC TACGCGGTGG AGCTTTCGGA AAGCGCCAGC GACCGGATCG TCGCCAGCGG CAAGGCGAGC ATCGCGGGCG GCAATGTCAC CCTGGCCATG GAAAACAGCC CCGACCTGCT CAGCCAGTCC CAGGTCGAGA GCCTGGTCGG CCGCCGCTAC GACATCCTCG ACGCCGCCGG CGGCATCGAC GGGCGCTTCG ACGCGGTATT GCCGAACTAC CTGTTCCTCG GCGGCACCCT GGACTACGCG GCCAACGCCA TCCGCCTGGA TATCGGACGC AACGGCACGG CCCTCGCCAG CGTCGCGCAG ACGCCCAACC AGGCGGCGGT CGCTGGTGCC GTGGAAGCGC TCGGCGCCGG CAACCCGGTC TACGAAAGCC TGCTCCTGTC GGAAAACGCC GCAACCGCCC AACGGGCCTT CCAACAATTG TCCGGGGAAA TCTACCCGGC GCTCGCCGGC CTGTTGCTCA ACGACAGCCG CTATCTGCGT GACAGCGTCG GCGAACGCCT GCGCCAGGCC AGCGACGGCG AGGCCGGCAG GGAGGCTCCC GAAGGCTGGT TCAAGGCGCT CGGTTCCTGG GGCAAGAGCG CCGATGGCAG CCACGGCAGC GAAGGCTACC GGCATTCGGT CGGCGGCTTC CTGCTCGGCG TCGACAGCCA GGTCGCCAGC GACACGCGCC TCGGCCTGGT GGCCGGCTAC AGCAACAGCT CGCTGAACAT GGACAGCAGC CTGCAATCCT CCGCCAGCAT CGACAGCTAC CACCTCGGCG CCTACCTCGG CCGGCAATTG CAGCAATGGC GCCTGAGCCT CGGCGCGGCG CACGCCTGGC ACCGCGCCGA GGTCAAGCGC GACCTGCAAT ACGGCGCCGT GGCCGGCAAG CAGAAGGCCA AGCTCGACGC ACAGAGCAGC CAGTTGTTCG CCGAGGCCGC CTACGCGCTG GGCTGGCGCA GCCTGGAGCT GGAACCCTTC GCCGGGCTGG CCTACGTGCA CGTCGCCAGC GATGACTTCC GCGAACGCGG TAGTGCCGCG GCCCTGGAGG GTGGCGACGA CAACCTGGAC GCCGCCTTCA CCACCCTGGG CCTGCGCGCG AAACGGCATT TCGAGCTGGA TGCCGAACGC CGCCTGGCGC TCTCCGGCAC CCTCGGCTGG CGCCACAACC TGAGCGACAC CACCCCGCAA CGCCACCTGG CGTTCGCCAG CGGCAGCCAG CCATTCAACG TGGAAAGCGT GGCCCTGTCC CGCGACGCCG CGCTGCTCGG CGTCGACGCC AGCCTCGCGG TGAATCGCGA AGTGAGCGTG CGGCTGGGCT ACAACGGCCT GCTGGGCAGC CGCGAGAAGG ACCATGGCGT CGGACTGGCC GTCGACTGGC GTTTCTGA
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Protein sequence | MTDDHSFRPR PTSLSAALLL GAWIAQPATA AYVEAGRPGD PASWRSAEYQ QDWGLERMRA DQAYAAGIDG QGVKIGEMDS GFDPSHPDTP ASRYQPVTAS GTYVDGTPFS VSGAMNGNND SHGTHVGGTL GASRDGVGMH GVAYAAQVYV ANTNQNDSFL FGPTPDPNYF KAAYQALADA GVRAINNSWG SQPKDVSYET LDGLHAAYAQ HYGRSTWLDA AAGVSRQGVI NVFSAGNSGY ANASVRSALP YFQPDLEGHW LAVSGLDQQN GQRYNRCGIA KYWCITTPGR LINSTMPGGG YANKSGTSMA APHATGALAL VMQRYPYLNN EQALQVLLTT ATQLDGTPTG APTDTVGWGV PDLGRAMHGP GQLLGRFEAN LPAGLRDEWS NPISDSALLQ RQAEDAAEHA AWQRTLKDKG WENGLPAGAS QQERTDYAIG MARDQAAAQR QYQGSLVKAG AGSLVLSGDS TYRGPTLVDG GLLSVDGSLL SAVEVNAGGT LGGSGRIGGL LARSGGTVAA GNSIGTLEVA GDLRFESGST YAVELSESAS DRIVASGKAS IAGGNVTLAM ENSPDLLSQS QVESLVGRRY DILDAAGGID GRFDAVLPNY LFLGGTLDYA ANAIRLDIGR NGTALASVAQ TPNQAAVAGA VEALGAGNPV YESLLLSENA ATAQRAFQQL SGEIYPALAG LLLNDSRYLR DSVGERLRQA SDGEAGREAP EGWFKALGSW GKSADGSHGS EGYRHSVGGF LLGVDSQVAS DTRLGLVAGY SNSSLNMDSS LQSSASIDSY HLGAYLGRQL QQWRLSLGAA HAWHRAEVKR DLQYGAVAGK QKAKLDAQSS QLFAEAAYAL GWRSLELEPF AGLAYVHVAS DDFRERGSAA ALEGGDDNLD AAFTTLGLRA KRHFELDAER RLALSGTLGW RHNLSDTTPQ RHLAFASGSQ PFNVESVALS RDAALLGVDA SLAVNREVSV RLGYNGLLGS REKDHGVGLA VDWRF
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