Gene PA14_18080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18080 
Symbol 
ID4381537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1550981 
End bp1551619 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID639324003 
ProductTetR family transcriptional regulator 
Protein accessionYP_789591 
Protein GI116051571 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCA CAAAGGAAGA TTCTGAAAAA ACCCGTACGG CCATCCTCCT GGCCGCCGAG 
GAACTGTTCC TGGAAAAAGG CGTGTCCCAT ACCAGCCTGG AACAGATCGC CAGGGCCGCC
GGGGTGACCC GTGGCGCCGT CTACTGGCAC TTCCAGAACA AGGCTCACCT GTTCAACGAG
ATGCTCAACC AGGTACGCCT GCCGCCGGAG CAACTCACCG AGCGCCTGTC CGGCTGCGAT
GGCAGCGACC CGCTGCGCTC GCTCTACGAC CTCTGCCTGG AGGCCGTGCA ATCGTTGCTG
ACTCAGGAGA AGAAGCGCCG CATCCTGACC ATCCTGATGC AACGTTGCGA ATTCACCGAG
GAACTGCGCG AGGCGCAGGA ACGCAACAAC GCCTTCGTGC AGATGTTCAT CGAACTCTGC
GAGCAGTTGT TCGCCCGCGA CGAATGCCGC GTGCGGCTGC ATCCGGGCAT GACCCCAAGG
ATCGCCTCGC GCGCCTTGCA CGCGCTGATC CTGGGCCTGT TCAACGACTG GTTGCGCGAC
CCGCGCCTGT TCGATCCGGA TACGGACGCG GAACACCTGC TGGAGCCGAT GTTCCGTGGC
CTGGTGCGCG ACTGGGGTCA GGCCAGCTCG GCGCCGTAG
 
Protein sequence
MRRTKEDSEK TRTAILLAAE ELFLEKGVSH TSLEQIARAA GVTRGAVYWH FQNKAHLFNE 
MLNQVRLPPE QLTERLSGCD GSDPLRSLYD LCLEAVQSLL TQEKKRRILT ILMQRCEFTE
ELREAQERNN AFVQMFIELC EQLFARDECR VRLHPGMTPR IASRALHALI LGLFNDWLRD
PRLFDPDTDA EHLLEPMFRG LVRDWGQASS AP