Gene PA14_17570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_17570 
Symbol 
ID4381577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1508087 
End bp1509490 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content67% 
IMG OID639323962 
Producthypothetical protein 
Protein accessionYP_789550 
Protein GI116051611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAC TGACGTTTCT AGGCGCCGCC CAGGAGGTCA CTGGCTCCTG TTATCTGCTG 
GAAACCCTCG ATGGCGTGAA GGTCCTGCTC GAATGCGGCA TGCGCCAGGG GCGCCGCGAA
GCCGACAACG GCAACCGCGC GCCCTTCCCC TTCGATCCCG CGAGCATCGA CGCGGTGGTC
ATCTCCCACG CCCACCTGGA CCACAGCGGT CTGCTGCCGC GCCTGGCGGC CGAGGGCTTC
AAGGGCCCGA TCTTCGCCAC CGAGGCCACC TGCGAACTGC TCGAACTCAT GCTGCTGGAC
TCCGCACACA TCCAGGAAAA GGACGCCGAG TGGGAGAACC GCTGGCGCAA CCGGATCGGC
AAGCCGAGCA TCAAGCCGCT GTATACCCAG GCCGACACCG AACGCGCGCT CAAGCTGCGC
CGGCCGATCA GCCTCGGCAG CACGGTGGCG GTCGCTCGTG GCGTGCGGGT GACCTTTCAC
AACGCCGGCC ACATCCTCGG CTCGTCGATC GTCGAAGTGC AGTTCCACGA CCAGGTGCAA
CCGCGCCGCC TGGTGTTTTC CGGCGACCTC GGCAACACCT GCTCGCCGTT GATGCGCGCG
CCCTCGCCGC TGAGCCGGGC CGACGTGGTG ATGCTCGAGT CCACCTACGG CGATCGCGAT
CACCGCGACA GCAACGAAAC CCTGGAGGAA CTGGCGGCGA TCCTCGAACA GGCGCATCGC
GACGGCGGCA ACGTGCTGAT CCCGTCGTTC GCCGTCGGCC GCACCCAGGA CCTGCTCTAC
TACCTCGGCC GCTTCTACCA GGAGGGCCGC CTGCCGCAAC AGGCGGTGTT CCTCGACAGC
CCGATGGCCG CCCGCGCCAA CGGCATCTAC CTGCGCCACA GCAACGAGTT CGACGACCGC
GACCGCGAGT ACATTCGCGG CACCGGCACC ACCCGCCTGG AGGAATGGCT GCCGGTCCTT
CGCGTCACCC GCAGCGCCGA CGAGTCGATG GCGATCAACC GGATCAAGAG CGGCGCGGTC
ATCATCGCCG GCAGCGGCAT GTGCACCGGT GGCCGTATCG TCCATCACTT CAAGCACAAC
CTCTGGCGCC CGGAATGCCA TGTGGTATTC CCCGGCTTCC AGGCGCGCGG CACCCTGGGC
CGCAACATCG TCGACGGCGC CAGCGCGGTT CGCGTGTTCC ACCAGCGCAT CGCGGTCAAG
GCGCAAATCC ATACCCTCGG CGGCTTCTCC GCCCACGCCG GGCAATCGCA GTTGCTCGAC
TGGGTCGCTC ACTTCGCCCA CCGTCCCGCG CTATACCTGA TACATGGCGA GCGGGAAAAG
ATGGAAGCGT TGCGGGGCGC GATCCGCGAG CGCCTCGACT GGGATGCCGA GATACCCGAG
CCCGGCGAAC GCATCGAGAT CTGA
 
Protein sequence
MASLTFLGAA QEVTGSCYLL ETLDGVKVLL ECGMRQGRRE ADNGNRAPFP FDPASIDAVV 
ISHAHLDHSG LLPRLAAEGF KGPIFATEAT CELLELMLLD SAHIQEKDAE WENRWRNRIG
KPSIKPLYTQ ADTERALKLR RPISLGSTVA VARGVRVTFH NAGHILGSSI VEVQFHDQVQ
PRRLVFSGDL GNTCSPLMRA PSPLSRADVV MLESTYGDRD HRDSNETLEE LAAILEQAHR
DGGNVLIPSF AVGRTQDLLY YLGRFYQEGR LPQQAVFLDS PMAARANGIY LRHSNEFDDR
DREYIRGTGT TRLEEWLPVL RVTRSADESM AINRIKSGAV IIAGSGMCTG GRIVHHFKHN
LWRPECHVVF PGFQARGTLG RNIVDGASAV RVFHQRIAVK AQIHTLGGFS AHAGQSQLLD
WVAHFAHRPA LYLIHGEREK MEALRGAIRE RLDWDAEIPE PGERIEI