| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_17340 |
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| Symbol | ispD |
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| ID | 4381596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1489702 |
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| End bp | 1490406 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639323943 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_789531 |
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| Protein GI | 116051630 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTT CCGACCTTCC CGCCTTCTGG ACGGTGATCC CCGCCGCCGG CGTGGGTTCG
CGCATGCGCG CCGACCGCCC GAAGCAATAT CTCGATCTTG CCGGCCGTAC CGTGATCGAG
CGCACCCTCG ATTGTTTCCT CGAGCACCCG ATGCTCAGGG GCCTGGTGGT CTGCCTGGCC
GAAGACGATC CCTACTGGCC CGGGCTGGAC TGCGCCGCCA GCCGGCATGT GCAGCGCGCC
GCCGGGGGCG TCGAACGCGC CGACTCAGTG TTGAGCGGCT TGCTGCGCCT GCTGGAGCTG
GGGGCACAGG CCGACGATTG GGTGCTGGTG CATGACGCTG CGCGACCGAA CCTGACCCGC
GGCGACCTCG ACCGCCTGCT CGAAGAACTC GCCGAAGATC CGGTCGGCGG GCTGCTGGCG
GTGCCGGCGA GGGACACCCT CAAGCGTGCC GACCGCGACG GCCGGGTCAG CGAAACCATC
GACCGCTCGG TGGTCTGGCT GGCCTATACG CCACAGATGT TCCGCCTCGG CGCCCTGCAC
CGGGCACTGG CCGATGCGCT GGTGGCCGGC GTGGCGATCA CCGACGAGGC TTCGGCGATG
GAGTGGGCCG GCTATGCGCC GAAACTGGTG GAAGGGCGCG CCGACAACCT GAAGATCACC
ACCCCGGAAG ACCTACTGCG CCTGCAGCGC AGTTTTCCGC ACTGA
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| Protein sequence | MTTSDLPAFW TVIPAAGVGS RMRADRPKQY LDLAGRTVIE RTLDCFLEHP MLRGLVVCLA
EDDPYWPGLD CAASRHVQRA AGGVERADSV LSGLLRLLEL GAQADDWVLV HDAARPNLTR
GDLDRLLEEL AEDPVGGLLA VPARDTLKRA DRDGRVSETI DRSVVWLAYT PQMFRLGALH
RALADALVAG VAITDEASAM EWAGYAPKLV EGRADNLKIT TPEDLLRLQR SFPH
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